Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08055 ATGGAAGGGAAGAGAAGCGTGCGTATGTGCTGTTTATGCAATGAAAGAAGAGCTTCTCTCAAGAGACCTAAAACCCTTCAACAGATTTGCAGAGAATGTTTCTATCTTGCTTTCGAAGATGAGATTCATCAACTCATCGTCTATAACCGCCTCTTCAACCGCGGCGACCGAGTCGCCATCGGAGCTTCCGGCGGCAAAGACTCCACTGTCCTTGCTTACGTCTTATCCAAACTCAACCGCGTTCACGATTACGGCCTCCATCTCTTCCTCCTCTCCGTCGACGAGGGCATCACCGGCTACCGCGACGATTCTCTTGAAACTGTTCATAGAAATCAGATTGAGTACGGATTGCCTCTCAAAGTTGTATCCTACAAGGATTTGTATGGTTGGACGATGGACGAGATCGTGAAACTGATTGGTCTGAAGAACAATTGCACCTTCTGTGGAGTGTTCCGTCGGCAGGCACTGGATCGAGGAGCGGCATTCCTGAAAGCGGATAAAGTGGTGACTGGGCACAACGCGGACGACATAGCTGAGACGGTGCTGTTAAACATATTAAGAGGAGATATAGCTAGACTGAGCAGATGCAGTTCAATCATAACAGGTGAAGATGGACCCATCCCTAGATGCAAACCTTTCAAGTACACTTATGAAAAGGAAATTGTTATGTATGCTTATTTCAAGAAGCTTGACTACTTTTCCACTGAATGCATTTATTCTCCAAATGCTTATCGTGGTTTTGCCCGTGAGTTCATCAAGGATTTGGAGAGAATCAGACCCAGGGCAATTCTCGACATCATCAAATCAGGGGAGAATTTCAGGATTTCTACCACTACCAAAATGCCTGAGCAGGGAATGTGTGAACGTTGTGGTTATATTTCTAGTCAGAAATGGTGTAAAGCTTGTGTTCTGCTTGATGGATTGAATCGAGGTTTGCCTAAATTGGGAATTGGACGGAGTCGGGTTGCCATTGGTTGCAAGGAAGAAAATGAAAGCCATGGAACAAAGAGCATTGAGAGCAAACAATGTGGATCTTTAGACTTCTGA 1047 0.4537 MEGKRSVRMCCLCNERRASLKRPKTLQQICRECFYLAFEDEIHQLIVYNRLFNRGDRVAIGASGGKDSTVLAYVLSKLNRVHDYGLHLFLLSVDEGITGYRDDSLETVHRNQIEYGLPLKVVSYKDLYGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAAFLKADKVVTGHNADDIAETVLLNILRGDIARLSRCSSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTTTKMPEQGMCERCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRVAIGCKEENESHGTKSIESKQCGSLDF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08055 348 PIRSF ATPase_YdaO 5 317 IPR035107 GO:0008033
Mepo3g08055 348 Pfam Zinc-ribbon 286 315 IPR032442 -
Mepo3g08055 348 Gene3D HUPs 9 332 IPR014729 -
Mepo3g08055 348 FunFam Cytoplasmic tRNA 2-thiolation protein 1 10 326 - -
Mepo3g08055 348 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 9 328 - -
Mepo3g08055 348 Pfam PP-loop family 58 245 IPR011063 -
Mepo3g08055 348 NCBIfam TIGR00269 family protein 207 306 IPR000541 GO:0000049|GO:0002098|GO:0034227
Mepo3g08055 348 CDD Alpha_ANH_like_II 57 243 - -
Mepo3g08055 348 Hamap Cytoplasmic tRNA 2-thiolation protein 1 [CTU1]. 8 320 IPR000541 GO:0000049|GO:0002098|GO:0034227
Mepo3g08055 348 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 43 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08055 Mepo-Chr3 93331407 93333484 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08055 K14168 - gmx:100816096 622.854