Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08054 ATGTCTATCATTTCCTCACCATTCTCCATTTCAATACCTTGTTCTAATTCTTCTTCTTCTTCTTCTTCTTCACTTTCCTTTTCAACTTCTTTTTCTACTCAATTTGTGAAATTGCAGCAGCAAAGAAAGAGAGGAGGAGCGATGGTGGTGAAGATGAGCTTAGAGGCTGGTGTTGGTGTGATGGGTACCAAATTGGGAATGATGAGCTTTTTCCAACCTAACGGTGAAGTTGTTCCCGTCACTGTTGTCGGTTTCAAAGAAGGTAACATCGTCACTCAAATCAAAACCGACGCCACTGACGGTTACAACGCCGTTCAAGTTGGTTACCGGAGGGTTAGAGACCGCAAATTGACCAAACCTGAATTGGGTCATCTTGAAAAGGCTGGAGCCATTCCTATGCGACATCTTCAGGAGTTTCGTCTTCAATCCGTTGATGGTTTTGAACCTAATCAGCGCCTTGTCTTTGATGAGCTTTTCAATGAGGGTGATCTTGTTGATGTCTCTGGCACTACTATCGGCAAGGGTTTCCAAGGTGGTATCAAGCGTCATAACTTCAAAAGAGGACCAATGAGCCATGGTTCTAAGAGTCACAGACAACTTGGATCCATTGGTGCCGGAACTACACCTGGTCGCGTATACAAGGGAAAGAAGATGCCTGGTAGGATGGGTGGAACCAACAGGAAGACCAGAAAGCTTAAGATTGTTAAAATTGATAAAGATCTTAATGTTATCATGATCAAAGGTGCTCTTCCTGGTAAGCCCGGTAATCTTCTACGGATTGCCCCTGCCAAGATTGTTGGCAAGAACATTCCAAAGAATTAG 822 0.438 MSIISSPFSISIPCSNSSSSSSSSLSFSTSFSTQFVKLQQQRKRGGAMVVKMSLEAGVGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPELGHLEKAGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08054 273 Gene3D Translation factors 185 265 - -
Mepo3g08054 273 FunFam 50S ribosomal protein L3, chloroplastic 185 265 - -
Mepo3g08054 273 NCBIfam 50S ribosomal protein L3 59 260 IPR019927 GO:0003735|GO:0005840|GO:0006412
Mepo3g08054 273 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g08054 273 PANTHER 50S RIBOSOMAL PROTEIN L3 34 265 IPR019927 GO:0003735|GO:0005840|GO:0006412
Mepo3g08054 273 MobiDBLite consensus disorder prediction 178 225 - -
Mepo3g08054 273 ProSitePatterns Ribosomal protein L3 signature. 159 182 IPR019926 -
Mepo3g08054 273 Gene3D - 90 149 - -
Mepo3g08054 273 SUPERFAMILY Translation proteins 58 269 IPR009000 -
Mepo3g08054 273 Pfam Ribosomal protein L3 153 239 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mepo3g08054 273 Hamap 50S ribosomal protein L3 [rplC]. 57 264 IPR019927 GO:0003735|GO:0005840|GO:0006412
Mepo3g08054 273 FunFam 50S ribosomal protein L3 89 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08054 Mepo-Chr3 93327279 93328471 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08054 K02906 - jre:109021071 425.631