Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08052 ATGACGATTCATTCTGTAGTGATACAGAAGCTTCTTAGCACAAATGCACACATTGGGCGTCAAGTCGCCACTCATCATTTCAAAGATTACACTTACGGCCTTCGCAACAGAATGGCAATCATCGATTCCGATAAGACTTTGATTTGTATGCGAAGTGCTATCAATTTCATCTCTTCCCTTGCTCGACATAATGGTCGCTTCATGTTCATCAACACCAATCCTCTCTTTGATGAAATCTTTGAGCTTATGTCCAAAAAGGTTGGATTCTACAGCCCCTCTTCCAATTCTCTCTGGCGTACTGGTGGTTTCCTCACCAACAGCAACAGTCCCAAGAAGTTTCGATCTCGCAACAAGAAACTCTGCTTCGGTCCCACTCAGCCTCCCGATTGCATCGTCATTGTCGATACTGAGAGCAAGTCTTCTGTTATCGATGAGGCTTTCAAACTTCACATTCCAATTGTCGCTCTTGTTGATTCTGCTATGCCTCTCCATACTTTCAGCCGCATTGCTTATCCCATTCCTGTTAACCCCTCTGTTCAATTTGTCTATCTTTTCTGTAATTTGATTACCAAAACACTGCTTCTCGAGAACAACAACAACTCTAATCTCAAACTTCTTCATGATCATTTGAGGGAACAACAAGCTGCCAAGGAGAAGACTAATTTGGCATCTAAGCTTAGCGTCACTGTTATCCCCTACGATGCTATATCACCCTTGCCCCAAGATATTGAACAAACTAAGAATCTTTTGGACAAGCTTGTTGTTTTGAAGCTCAATCATGCCTCCGGAACTAATATGGGTTTTCAAAACCCCAAATCTGCAATGGATGTTTGTGACGGACAGACATTTTTAGACTTGATCATTAACCAGATTGAGACCCTCAACTCCAAGTACGGAAGCCGGGTTCCATTGCTGATTTTTAACAAAGATGACACTCATGATAGTACTTTAAAGGTTTTGGAAAAGTATTCAGAATCCAGCATTGATGTGCGCACTTTTACGAAGGGTGAAGGTCCAGAGCTAACATTATCAGATGGACATAGCAGTAAGGAGAAAGTGCATACATTTGACGATGGTGATATATTCCGTTCACTAATGATAGGTGGAACCCTGGATTTATTATTGTCACAGGGAAAGGAGTATATCTTTGTGATGAAGTGCGACAATGTGGGAACTATCGTTGATCCAAATATACTAAATCATTTGATGACAAATGCTATTGATTATTGCATGGAGGTGACTCCAAGCCATTCGTCTAATGTGATCTTAACTCCAATGAATTTTAAGTTTCAGGAGATTGCTCGAAATCAAGATAAAGATTTGAAGGACAAATGCAAACTCATTGATACAACAAACATGTGGGCGAGTTTAAGAACCATTAAGAGCCTTTTTGACACTAATAGACTAAAGCTCCAAATGCCCCCAATCTCAAAGGAGGATGGCTATGATCAAACTCTTCTACAAGGAACAGATGCTGGACCGGCAGTACAGTTCTTTAATAATGTGATTGGTGTCTCCATACCCGAATCTCGTTTTGTTCCCTTGGATGCAACATCAGATTTACTGCTTCTGCAGTCAGATATATACACTTCTAGAGAAGGTGTTTTAGCTCGCAATCCAGCTAGAATCGACGCTTTAAATCCTGTGATAGACTTGGGACCCGAATATGAAAAGATTGCTGACTTTCAAAGTCGATTCAAATCCATTCCAAGTATTGTGGGGTTGGATAGTTTGATTGTGAGAGGCGACGTGTGGTTTGGGGCTAATATTACTTTGAAGGGGCATGTGACTATTGTTGCAAAACCGGGCTTGAAATTGGAAATTCCAGATGGAGTTGTGATTGAGAATAAGGATTCCAATGGTTCTCCAATCGGGAGTCATAATCTTGATATTTCTAGACAACTCTTTTTTCCCTCCTTTCTGCTGGACTTTGAAATTAAATACACCGAATTCTGA 1956 0.4075 MTIHSVVIQKLLSTNAHIGRQVATHHFKDYTYGLRNRMAIIDSDKTLICMRSAINFISSLARHNGRFMFINTNPLFDEIFELMSKKVGFYSPSSNSLWRTGGFLTNSNSPKKFRSRNKKLCFGPTQPPDCIVIVDTESKSSVIDEAFKLHIPIVALVDSAMPLHTFSRIAYPIPVNPSVQFVYLFCNLITKTLLLENNNNSNLKLLHDHLREQQAAKEKTNLASKLSVTVIPYDAISPLPQDIEQTKNLLDKLVVLKLNHASGTNMGFQNPKSAMDVCDGQTFLDLIINQIETLNSKYGSRVPLLIFNKDDTHDSTLKVLEKYSESSIDVRTFTKGEGPELTLSDGHSSKEKVHTFDDGDIFRSLMIGGTLDLLLSQGKEYIFVMKCDNVGTIVDPNILNHLMTNAIDYCMEVTPSHSSNVILTPMNFKFQEIARNQDKDLKDKCKLIDTTNMWASLRTIKSLFDTNRLKLQMPPISKEDGYDQTLLQGTDAGPAVQFFNNVIGVSIPESRFVPLDATSDLLLLQSDIYTSREGVLARNPARIDALNPVIDLGPEYEKIADFQSRFKSIPSIVGLDSLIVRGDVWFGANITLKGHVTIVAKPGLKLEIPDGVVIENKDSNGSPIGSHNLDISRQLFFPSFLLDFEIKYTEF 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08052 651 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 193 515 IPR029044 -
Mepo3g08052 651 Gene3D Hexapeptide repeat proteins 516 623 - -
Mepo3g08052 651 Gene3D - 2 192 - -
Mepo3g08052 651 PANTHER - 49 621 IPR016267 GO:0003983|GO:0006011
Mepo3g08052 651 SUPERFAMILY Nucleotide-diphospho-sugar transferases 217 601 IPR029044 -
Mepo3g08052 651 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mepo3g08052 651 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mepo3g08052 651 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mepo3g08052 651 FunFam UTP--glucose-1-phosphate uridylyltransferase 516 625 - -
Mepo3g08052 651 SUPERFAMILY Ribosomal protein S2 8 198 IPR023591 -
Mepo3g08052 651 Pfam UTP--glucose-1-phosphate uridylyltransferase 220 593 IPR002618 GO:0070569
Mepo3g08052 651 ProSitePatterns Ribosomal protein S2 signature 1. 8 19 IPR018130 GO:0003735|GO:0005840|GO:0006412
Mepo3g08052 651 Pfam Ribosomal protein S2 126 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mepo3g08052 651 Pfam Ribosomal protein S2 11 111 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08052 Mepo-Chr3 93316387 93323089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08052 K00963 - gmx:100812583 843.958