Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08037 ATGCTAGCTCTTCATTCCGGTTCTAGTTCTAATGTCTATGCCAACACTCAACCTGTTGAATTTCACCAACAGAGGGACGAGGTTGATCGCTTTTTAATATCACAGAACCAGAAATTGAGACTATTGTTGCAAGAGCAGCGAAGGACAATATTGAAGAAGGTAGAATATGATGTGTTTCATATACTAAGACAAAAGGATGAACAAATTGCACAAGCTACAAAGAAAAGGATGGAGTTGGAACAATTTTTGACAAGACTAGAGACAGAGAATCAATCATGGCGGAGAGCTGCACATGAAAATGAAGCTATGGTTTTATCGCTCAATAACGCCTTAGAATCTATCAAAGAAAGAGCAGCATTGGTGGCAGAAGATGTAGAGTCATGTTGTGACATGAAAAATGGTGAAGAAGGAACAGGGGAAAATAGTGGAGTGTGTTGTGATCAAGAAACTACCGGGTTGAACATGATTTGCAAATGTTGTTATTCAAGGATGTCGTCTTTTATGTTCCTTCCTTGCAGGCATCTTTGTTCGTGTAAAGCGTGTGAACCTTCTCTCCAAGCGTGTCCTGTGTGCCTCATGCCAAAGAGATCTATTATAGAGACTCTCTTTTTCTAG 615 0.4 MLALHSGSSSNVYANTQPVEFHQQRDEVDRFLISQNQKLRLLLQEQRRTILKKVEYDVFHILRQKDEQIAQATKKRMELEQFLTRLETENQSWRRAAHENEAMVLSLNNALESIKERAALVAEDVESCCDMKNGEEGTGENSGVCCDQETTGLNMICKCCYSRMSSFMFLPCRHLCSCKACEPSLQACPVCLMPKRSIIETLFF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08037 204 Coils Coil 62 89 - -
Mepo3g08037 204 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 19 200 IPR017066 -
Mepo3g08037 204 PIRSF SBP1_RNase_bind 4 204 IPR017066 -
Mepo3g08037 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 203 IPR013083 -
Mepo3g08037 204 Pfam Zinc finger, C3HC4 type (RING finger) 155 196 - -
Mepo3g08037 204 ProSiteProfiles Zinc finger RING-type profile. 157 191 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08037 Mepo-Chr3 93211606 93212297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08037 156 191 Miscellaneous Gene Families AT2G21380 44.444 7.25e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08037 K19042 - gmx:100776899 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08037 3 93211606 93212297 Mepo3g08037 3 93211606 93212297 ECH