Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08032 ATGACTACCACTCGCAATCTCGCCTTCCTTTCCATATTATTAGTTCTCTTACCGGCTATTGTCGTAGCACATGATCATGGTCGTGTTGCAGGCATTAACAATGTTACTTATGATGGCAAATCACTCTTTGTCAATGGAAGACGCGAGCTCCTCTTCTCTGGTTCCATCCATTACACTCGCAGCACCCCTGATGCGTGGCCAGACATTCTTGATAAGGCAAGACATGGAGGTTTGAATGTTATTCAAACTTACGTGTTTTGGAACGCTCATGAGCCAGAGCAAGGCAAGTTTAACTTTGAAGGCAACAATGATTTGGTGAAGTTCATTAGGCTTGTTCAATCAAAAGGAATGTATGTGACCCTCAGGGTTGGACCGTTCATCCAAGCAGAATGGAACCACGGAGGACTTCCATATTGGCTAAGAGAGGTTCCAGGGATCATATTCCGCTCTGACAATGAACCCTATAAGAAACACATGAAAGCATACGTGTCAAAAATTATCCAAATGATGAAAGATGAGAAGCTCTTTGCTCCCCAAGGAGGCCCCATCATCTTGGCACAAATTGAAAATGAGTACAACCATATCCAACTTGCTTATGAAGAGAAGGGAGATAGTTATGTTCAGTGGGCCGCAAATATGGCAGTGGCCTTGGACATCGGAGTTCCGTGGATCATGTGCAAGCAGAAGGACGCTCCTGATCCCGTCATCAATGCATGCAATGGAAGACATTGTGGTGATACCTTCTCAGGACCAAACAAACCATACAAGCCATCCCTATGGACTGAAAATTGGACCGCTCAGTACAGAGTATTTGGTGATCCAGTATCACAGAGATCTGCTGAAGATATTGCCTTCTCAGTTGCCCGATTCTTCTCCAAAAATGGAAATTTGGTCAATTACTATATGTACCATGGTGGAACAAACTTTGGAAGAACGACCTCTGCCTTCACAACAACCCGTTATTACGATGAGGCACCTCTTGATGAATACGGTATGGAGAGGCAGCCAAAATGGAGCCACCTTAGGGACGCCCACAAGGCTATGCTCCTTTGCAGAAAGGCTATTCTCGGTGGTGTTCCCACTGTCCAAAAGATCAACGACTACCACGAGGTTAGAATCTTTGAGAAGCCTGGAACAAGCACATGTGCTGCTTTTATCACCAATAACCACACTAATCAAGAAGCAACAATCAGTTTCAGAGGTTCTAACTACTTTTTGCCAGCACATTCCATTAGCGTCCTCCCAGATTGCAAGACTGTCGTCTACAACACACAAAATATTGTTTCACAACATAATAAAAGGAACTTTGTGAAGTCTGCTGTCGCAAACAACCTCAAATGGGAGGTATTTCTTGAGGCAATTCCATCATCTAAGAAACTTGAATCAAATCAAAAAGTTCCATTAGAGCTTTACACATTGCTTAAAGACACCACAGATTATGGATGGTACACCACCAGCTTTGAGTTGGGTCCAGAAGACTTGCCAAAGAAGAGTGCAATTCTTCGTATTATGAGTCTTGGACACACACTATCTGCATTTGTTAATGGACAATACATTGGTACTGATCATGGTACCCATGAAGAAAAATCTTTTGAATTTGAGCAACCAGCTAACTTCAAGGTTGGAACCAACTACATTTCCATCTTGGCTACCACTGTTGGACTACCTGACAGTGGAGCTTATATGGAACATAGGTACGCCGGACCCAAGTCCATATCCATACTTGGTCTCAATAAAGGAAAACTTGAACTCACTAAGAACGGTTGGGGTCATCGGGTTGGTCTCAGAGGTGAGAAACTTAAAGTTTTCACCGAGGAAGGATCAAAGAAGGTTCAATGGGATCCGGTCACAGGAGAAACGCGTGCTCTCTCCTGGTTGAAGACAAGATTTGCCACACCAGAGGGAAGAGGTCCAGTTGCCATCAGGATGACTGGTATGGGAAAAGGAATGATTTGGGTGAACGGAAAAAGCATCGGTCGTCACTGGATGACATTCCTCACCCCTCTTGGAACACCTAGTCAAGCAGAGTACCACATCCCAAGAGCTTACCTGAACGAAAAGGACAATTTGCTTGTTGTATTGGAAGAGGAGAAGGGAAGTCCAGAAAAAATTGAGATAATGATTGTTGACAGAGATACGATCTGCAGTTACATTACAGAGAACAGTCCTGCCAATGTCAATTCTTGGGGATCTAAGAATGGACAGTTTTGTTCCATTGGCAAAATTTCTGGACCACAGGCTTCACTAAAATGTCCCAGCGGCAAAAAGATTGTTGCTGTCGAGTTTGCAAGCTTTGGTAATCCTACTGGTTACTGTGGAAGTTTTGCTCTTGGAAATTGTAACGTTGCTGCTGCTAAGGGTGTTGTTGAGAAGGCATGCTTGGGGAAAGAAGAATGTTTGGTTGAAGTGAATCGTGCAAATTTCAATGGTCAGGGTTGCGCAGGTTCAGTGAATACACTTGCCATCCAAGCTAAGTGTTCCTACTAG 2487 0.4387 MTTTRNLAFLSILLVLLPAIVVAHDHGRVAGINNVTYDGKSLFVNGRRELLFSGSIHYTRSTPDAWPDILDKARHGGLNVIQTYVFWNAHEPEQGKFNFEGNNDLVKFIRLVQSKGMYVTLRVGPFIQAEWNHGGLPYWLREVPGIIFRSDNEPYKKHMKAYVSKIIQMMKDEKLFAPQGGPIILAQIENEYNHIQLAYEEKGDSYVQWAANMAVALDIGVPWIMCKQKDAPDPVINACNGRHCGDTFSGPNKPYKPSLWTENWTAQYRVFGDPVSQRSAEDIAFSVARFFSKNGNLVNYYMYHGGTNFGRTTSAFTTTRYYDEAPLDEYGMERQPKWSHLRDAHKAMLLCRKAILGGVPTVQKINDYHEVRIFEKPGTSTCAAFITNNHTNQEATISFRGSNYFLPAHSISVLPDCKTVVYNTQNIVSQHNKRNFVKSAVANNLKWEVFLEAIPSSKKLESNQKVPLELYTLLKDTTDYGWYTTSFELGPEDLPKKSAILRIMSLGHTLSAFVNGQYIGTDHGTHEEKSFEFEQPANFKVGTNYISILATTVGLPDSGAYMEHRYAGPKSISILGLNKGKLELTKNGWGHRVGLRGEKLKVFTEEGSKKVQWDPVTGETRALSWLKTRFATPEGRGPVAIRMTGMGKGMIWVNGKSIGRHWMTFLTPLGTPSQAEYHIPRAYLNEKDNLLVVLEEEKGSPEKIEIMIVDRDTICSYITENSPANVNSWGSKNGQFCSIGKISGPQASLKCPSGKKIVAVEFASFGNPTGYCGSFALGNCNVAAAKGVVEKACLGKEECLVEVNRANFNGQGCAGSVNTLAIQAKCSY 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08032 828 Gene3D - 593 720 - -
Mepo3g08032 828 SUPERFAMILY Galactose-binding domain-like 587 735 IPR008979 -
Mepo3g08032 828 Pfam Galactose binding lectin domain 749 826 IPR000922 GO:0030246
Mepo3g08032 828 Gene3D Glycosidases 32 350 - -
Mepo3g08032 828 FunFam Beta-galactosidase 591 715 - -
Mepo3g08032 828 FunFam Beta-galactosidase 32 351 - -
Mepo3g08032 828 Gene3D - 734 828 IPR043159 -
Mepo3g08032 828 Pfam Beta-sandwich domain in beta galactosidase 356 427 IPR041392 -
Mepo3g08032 828 PANTHER BETA-GALACTOSIDASE RELATED 23 737 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 Gene3D - 361 568 - -
Mepo3g08032 828 FunFam Beta-galactosidase 301 429 - -
Mepo3g08032 828 SUPERFAMILY Galactose-binding domain-like 411 569 IPR008979 -
Mepo3g08032 828 CDD Gal_Rha_Lectin_BGal 744 826 - -
Mepo3g08032 828 ProSiteProfiles SUEL-type lectin domain profile. 741 827 IPR000922 GO:0030246
Mepo3g08032 828 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 180 192 IPR019801 GO:0004553|GO:0005975
Mepo3g08032 828 SUPERFAMILY (Trans)glycosidases 34 351 IPR017853 -
Mepo3g08032 828 Pfam Glycosyl hydrolases family 35 41 347 IPR031330 -
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 259 274 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 121 140 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 296 311 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 315 331 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 45 62 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 178 193 IPR001944 GO:0004553|GO:0005975
Mepo3g08032 828 PRINTS Glycosyl hydrolase family 35 signature 66 84 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08032 Mepo-Chr3 93180214 93184001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08032 35 826 Glycoside Hydrolase AT2G16730 59.551 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08032 - - gmx:100791456 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08032 3 93180214 93184001 Mepo3g08032 3 93180214 93184001 ECH