Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08019 ATGAGCACGACGACGCAACTGCTTCACACCGCGGCTGCACTGATACCATCGGTCAAACCTTGTTGGCGATGTAATAACCGAAAAACCGCAACTGCAACTATATTTCAGACTCAGAGGCGTGGGTGGATCCTCACAGGAAATGCGTCAAGAATAATGATAAAGTGTATGGCGAATCCAAGGAGAGTTAAAATGGTTGCCAAACAAATTAGGAGAGAACTTTCTGATATGCTTATCACCGATAATGTCTTGCAATTTGCCGTTCTTCCAGAAGCTTCCTTAGGTGCTGATTCTTACCTCTCTTCCGTCACCACTATCACCGACGTTGAAATCACCGCTGATTTACAGGTGGTTAGGGTGTATGTATCTGTTTTTGGAGATGAAAGAGGGAAGGAAGTGGCCATGGCTGGGTTGAAATCAAAAGCCAAATATGTTCGCGGTGAGTTGGGGAGGCGTATGAAGTTGCGGTTAACTCCCGAGATACGCTTTTTGGAGGATGAATCTTTTGAGAGAGGAAGCAGAGTCATTGCAATATTAGATAAAATTAAGAATGAGAAGAGTGAAACAAGCAAAAACATGGAGCAGTTGGATTCATCAGTGAACGGAGATGACACTGAGCAGTTGAATTCATCATCAGATGAAGACGATGCTGATTGGGAAGATGAAGACCCTGAAGAAGGTATCATTTATGTGGAATAG 696 0.4368 MSTTTQLLHTAAALIPSVKPCWRCNNRKTATATIFQTQRRGWILTGNASRIMIKCMANPRRVKMVAKQIRRELSDMLITDNVLQFAVLPEASLGADSYLSSVTTITDVEITADLQVVRVYVSVFGDERGKEVAMAGLKSKAKYVRGELGRRMKLRLTPEIRFLEDESFERGSRVIAILDKIKNEKSETSKNMEQLDSSVNGDDTEQLNSSSDEDDADWEDEDPEEGIIYVE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08019 231 FunFam probable ribosome-binding factor A, chloroplastic 56 172 - -
Mepo3g08019 231 MobiDBLite consensus disorder prediction 192 206 - -
Mepo3g08019 231 Gene3D - 56 172 IPR015946 -
Mepo3g08019 231 MobiDBLite consensus disorder prediction 207 231 - -
Mepo3g08019 231 Coils Coil 178 198 - -
Mepo3g08019 231 Hamap Ribosome-binding factor A [rbfA]. 60 178 IPR000238 GO:0006364
Mepo3g08019 231 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 47 231 IPR000238 GO:0006364
Mepo3g08019 231 Pfam Ribosome-binding factor A 61 177 IPR000238 GO:0006364
Mepo3g08019 231 MobiDBLite consensus disorder prediction 186 231 - -
Mepo3g08019 231 NCBIfam 30S ribosome-binding factor RbfA 56 183 IPR000238 GO:0006364
Mepo3g08019 231 ProSitePatterns Ribosome-binding factor A signature. 144 165 IPR020053 GO:0006364
Mepo3g08019 231 SUPERFAMILY Ribosome-binding factor A, RbfA 56 181 IPR023799 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08019 K02834 - gmx:100812407 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08019 3 93033288 93034850 Mepo3g08019 3 93033288 93034850 ECH