Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08013 ATGGCATTGGGCAGCAAATTGTTGTTGTTTGTTCTACTACTGGCTATTGGAGGAAGAAGTGTGAATGCGCATGATTATGCAGATGCATTATCGAAGGCAATCATGTTCTTCGAAGGACAACGATCGGGGTTTTTACCAGAGGACCAGAGACAGAAGTGGCGTGCCAATTCGGGTTTGAGTGATGGGTGGACTTACAACACTGATCTTACAGGCGGTTACTACGACGCGGGTGATAACATCAAATTTGGGTTTCCTATGGCGTTTACGACGACAATGTTGTCATGGAGTGTGATTGAGTTTGGTGAAAACATGCCTCCTAATGAACTCAGAAACGCTTTGGTTGCAATTCGTTGGAGTACTGATTATTTGCTTAAGACTGTTTCTCAGTCTAACCGCATTTTTGTTCAGGTGGGTGACCCAATCTCAGACCACAACTGTTGGGAGAGGCCAGAAGACATGGACACAAACAGAAAAGTGTATGCCGTTGATGCACCTAACCCAGCTTCCGATGTCGCAGGAGAAACAGCCGCCGCACTTGCTGCTTCATCGATGGCATTTCGATCATCGGATCCCGGTTATGCTGAGACATTACTAAGAAATGCTGTTAAGGCATTTCAATATGCAGATAGTTACAGGGGCGCATACAGTGACAATGCTGATGTTAAGGATGGTGTCTGTCCTTATTATTGTGATTTTGATGGATACCAGGACGAATTGTTATGGGGAGCCGCATGGTTAAGGAGGGCTACTCAGGATGAAAATTTCCTAAACTACATTCAAAGCAATGGTAAAACACTTGGTGCTGAAGACAACATCAATGAGTTCGGTTGGGACAACAAGCATGCTGGCCTCAACGTTCTTGTCTCCAAGGAAGTCCTAGAAGGAAATCTAGAATCTCTTCAATCTTACAAGACCTCGGCAGACAGCTTCCTATGCACACTACTACCTGAAACATCAAGTTCACACATCGAGTACACTCCTGGTGGACTCATATACAGACCAGGTGGAAGCAACTTACAACATGCAACTTCAATTGCTTTCCTTGAGTTAGTCTACGCCAATTACTTATCTCGCACGTCACAAACCATCAATTGTGGCAATGTTTATGTTAGTGCACAAGCACTTCGGGAGCGTGCCAAGAGACAAGTTGATTACATTTTAGGTGATAACCCCTTGGGTTTATCTTACATGGTTGGTTATGGTAACAACTATCCACAACGTATTCATCACCGTGGCTCATCTCTACCTTCTATTAAGGACCATCCTCAACAGATTGCTTGCAAGGAAGGTTCAATATACTTCAATTCAACAAATCCTAACCCAAATGTTCTTGTAGGAGCTATTGTGGGAGGACCTGGAGAAGATGATGTTTATGTGGATGACAGGGCTGATTATAGAAAATCTGAGCCAACCACATATATTAATGCGCCATTTGTTGGGGTTTTAGCATATTTTGTTGCTAATTAA 1467 0.4349 MALGSKLLLFVLLLAIGGRSVNAHDYADALSKAIMFFEGQRSGFLPEDQRQKWRANSGLSDGWTYNTDLTGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGENMPPNELRNALVAIRWSTDYLLKTVSQSNRIFVQVGDPISDHNCWERPEDMDTNRKVYAVDAPNPASDVAGETAAALAASSMAFRSSDPGYAETLLRNAVKAFQYADSYRGAYSDNADVKDGVCPYYCDFDGYQDELLWGAAWLRRATQDENFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVLEGNLESLQSYKTSADSFLCTLLPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNVYVSAQALRERAKRQVDYILGDNPLGLSYMVGYGNNYPQRIHHRGSSLPSIKDHPQQIACKEGSIYFNSTNPNPNVLVGAIVGGPGEDDVYVDDRADYRKSEPTTYINAPFVGVLAYFVAN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08013 488 PANTHER ENDO-1,4-BETA-GLUCANASE 11 486 - -
Mepo3g08013 488 Pfam Glycosyl hydrolase family 9 26 482 IPR001701 GO:0004553|GO:0005975
Mepo3g08013 488 SUPERFAMILY Six-hairpin glycosidases 21 487 IPR008928 GO:0005975
Mepo3g08013 488 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 385 411 IPR018221 -
Mepo3g08013 488 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 458 476 IPR033126 -
Mepo3g08013 488 Gene3D - 22 488 IPR012341 GO:0005975
Mepo3g08013 488 FunFam Endoglucanase 22 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08013 Mepo-Chr3 92990306 92994340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08013 7 488 Glycoside Hydrolase AT1G70710 60.788 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08013 K01179 - gmx:100799911 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08013 3 92990306 92994340 Mepo3g08013 3 92990306 92994340 ECH