Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08008 ATGAGTTCAGACAGCCGCAGCCGAAGCAGGAGCAGGAGCAGAAGTCGTAGCCCAGGAATCCGTAAGATTCGCTCTGATCGACATTCCTATCGCGATGCTCCTTACAGGAGAGATTCAAGTCGGGGTTTCAGCCGAGACAATTTGTGCAAGAACTGCAAGAGGCCTGGTCATTATGCTAGAGAATGCCCTAATGTTGCGGTTTGCCACAATTGTGGTCTTCCAGGGCACATTGCTTCTGAATGCTCCACGAAATCCGTGTGCTGGAATTGCAAAGAACCTGGCCACATGGCCAGCAATTGTCCAAATGAGGGCATTTGCCACACCTGTGGTAAAACTGGCCACCGTGCTAGGGATTGCTCAGCTCCATCACTGCCTCCAGGGGACCTAAGGTTGTGCCATAATTGCTATAAGCAGGGCCACATTGCTGTTGAATGTACCAACGAGAAGGCTTGCAATAATTGTAGGAAAACAGGGCACTTGGCACGTGATTGTCCAAATGACCCAATTTGCAATGTGTGCAATGTTTCTGGACACTTGGCTAGACAATGTCCAAAATCCGATGTTATTGGAGACCACAGAGGCAGAGGCAGCTTCCGTGGTGCTGGTGGCGGTGTTGGTGGTGGTGGTGGTTACCGTGATGTCGTGTGCAGGAACTGCCAGCAATTTGGTCACATGAGTCGGGACTGCATGGGGCCGTTGATGATTTGTCATAACTGTGGAGGTCGTGGTCACTTGGCATATGAGTGCCCTTCAGGTCGTTTTGTGGATCGCTACCCTAGTAGGAGGTACTAA 792 0.5088 MSSDSRSRSRSRSRSRSPGIRKIRSDRHSYRDAPYRRDSSRGFSRDNLCKNCKRPGHYARECPNVAVCHNCGLPGHIASECSTKSVCWNCKEPGHMASNCPNEGICHTCGKTGHRARDCSAPSLPPGDLRLCHNCYKQGHIAVECTNEKACNNCRKTGHLARDCPNDPICNVCNVSGHLARQCPKSDVIGDHRGRGSFRGAGGGVGGGGGYRDVVCRNCQQFGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFVDRYPSRRY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 132 147 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 170 185 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 MobiDBLite consensus disorder prediction 1 42 - -
Mepo3g08008 263 SUPERFAMILY Retrovirus zinc finger-like domains 40 84 IPR036875 GO:0003676|GO:0008270
Mepo3g08008 263 Gene3D - 211 253 - -
Mepo3g08008 263 Gene3D - 104 149 - -
Mepo3g08008 263 Gene3D - 84 103 - -
Mepo3g08008 263 Pfam Zinc knuckle 131 148 - -
Mepo3g08008 263 Gene3D - 150 190 - -
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 106 119 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 49 64 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 151 166 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 86 102 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 67 82 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 169 185 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 215 229 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 235 251 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 150 166 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 48 64 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Pfam Zinc knuckle 105 120 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 216 229 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 68 81 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 Gene3D - 4 83 - -
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 87 102 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SUPERFAMILY Retrovirus zinc finger-like domains 208 252 IPR036875 GO:0003676|GO:0008270
Mepo3g08008 263 ProSiteProfiles Zinc finger CCHC-type profile. 236 251 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SUPERFAMILY Retrovirus zinc finger-like domains 85 122 IPR036875 GO:0003676|GO:0008270
Mepo3g08008 263 PANTHER - 6 257 - -
Mepo3g08008 263 SUPERFAMILY Retrovirus zinc finger-like domains 126 167 IPR036875 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 86 102 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 131 147 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 235 251 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 150 166 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 48 64 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 215 231 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 67 83 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 169 185 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 SMART c2hcfinal6 105 121 IPR001878 GO:0003676|GO:0008270
Mepo3g08008 263 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08008 Mepo-Chr3 92939337 92943415 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08008 K09250 - gmx:100775501 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08008 3 92939337 92943415 Mepo3g08008 3 92939337 92943415 ECH