Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07989 ATGTGTGATGTTATGCCCGCACCTCTTGACCGACCTGTCAAAATTGGTCATGAGATGGAACATTCTGAGGATGAAAAAAAGAAAAGGGTTGGGTCTATAAAGAAGGTGGCAATGACTGCCTCAAGCAAGTTCAAAAATTCATTCACCAAGAAAGGGAGGAAGCACAGCAGAGTTATGTCTATCTGTATTGAGGATAGTTTTGATGCAGAAGAGTTACAAGCAGTTGATGCTTTTCGCCAAACACTTATCTTAGAAGAGCTCTTACCCTCAAAGCATGATGATCCTCATATGATGCTAAGATTTTTGAGGGCAAGAAAGTATGACATAGAGAAAACAAAACAAATGTGGACAGATATGCTTAAGTGGAGGAAGGAATTTGGTGCTGACACTATCATGGAGGTATATTCCAAAGAAAAAATAAATAAATCATGTTCATGTCATGTACTTTTACATAACATTTTTATATATGCATCTTATCATAAATTGCTTGTTTTGTTTTTTTATAAGGATTTTGAATTCGAGGAACTAGATGAAGTTCTAAAATACTATCCACAAGGACATCATGGAGTTGATAAGGATGGAAGACCTGTTTACATTGAAAGATTGGGTCAAGTTGATTGTAACAAGTTGTTGCAAGTAACATCAGTGGAACGTTATCTCAAGTACCATGTACGAGAGTTTGAGAGGGCTTTTGCTGTTAAGTTGCCTGCATGTTCAATTGCAGCAAAGAAGCATATTGACCAAAGCACAACTATTTTGGATGTGCAAGGAGTGGGTCTTAGAAGTATGAACAAAGCTGCAAGGGATCTCCTCCAGAGGCTTCAGAAGATTGATGGTGACAACTATCCTGAGTCCCTGAACCGTATGTTCATCATCAATGCTGGTTCTGGATTTAGGCTATTGTGGAACACTGTAAAGTCATTCCTAGATCCCAAAACCACCTCAAAAATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAGTCATTGATGCCAGTGAACTTCCAGAATTGTTGGGTGGTACTTGTACTTGTGCCGATAAAGGTGGCTGCATGCTATCTGACAAGGGTCCATGGAATGATCCAGAGATCTTGAAGATGGCTCAAAATGGTGTTGGCAGATACACAATAAAAGCTTTATCCGGAACTGAGGAGAAAACAATCAAACAAGAAGAAACTGAATATAAGAAGGGATTCAAAGATTCATTTCCAGAGACACTTGATGTTCATTGTTTGGATCAACCCAAATCCTATGGTGTTTATCAGTATGATTCCTTTGTTCCAGTACTTGACAAAGCAGTTGATTCTTCGTGGAAGAAAACAATACAAAATGACAAATACGTGCTTTCGAAAGATTGTTTGTCCAACAATAATGGAATGAATTCTGGTGGATTTAGCAAACAATTTGTGGGTGGAATAATGGCACTTGTTATGGGAATTGTGACCATAATTCGCATGACCAGTAGCATGCCAAGGAAAATCACAGAAGCAGCACTTTATGGTGGCAACTCAGTGTATTATGATGGCTCCATGATGAAAGCACCTGCAATTTCAAACAATGAGTATATGGCCATGATGAAGCGCATGGCTGAACTTGAAGAGAAAGTCACTGTTCTCAGTGTTAAGCCTGTCATGCCTCCAGAAAAAGAGGAAATGCTTAATAATGCTCTAACCAGGGTCAGTACTCTTGAACAAGAGTTGGGTGCAACCAAAAAGGCACTAGGAGATGCCCTTACTCGACAAGTAGAACTTGAAGGTCAAATTGACAAGAAGAAAAAGAAGAAGAAGTTGTTCCGCTTCCACTGGTGA 1815 0.3934 MCDVMPAPLDRPVKIGHEMEHSEDEKKKRVGSIKKVAMTASSKFKNSFTKKGRKHSRVMSICIEDSFDAEELQAVDAFRQTLILEELLPSKHDDPHMMLRFLRARKYDIEKTKQMWTDMLKWRKEFGADTIMEVYSKEKINKSCSCHVLLHNIFIYASYHKLLVLFFYKDFEFEELDEVLKYYPQGHHGVDKDGRPVYIERLGQVDCNKLLQVTSVERYLKYHVREFERAFAVKLPACSIAAKKHIDQSTTILDVQGVGLRSMNKAARDLLQRLQKIDGDNYPESLNRMFIINAGSGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEVIDASELPELLGGTCTCADKGGCMLSDKGPWNDPEILKMAQNGVGRYTIKALSGTEEKTIKQEETEYKKGFKDSFPETLDVHCLDQPKSYGVYQYDSFVPVLDKAVDSSWKKTIQNDKYVLSKDCLSNNNGMNSGGFSKQFVGGIMALVMGIVTIIRMTSSMPRKITEAALYGGNSVYYDGSMMKAPAISNNEYMAMMKRMAELEEKVTVLSVKPVMPPEKEEMLNNALTRVSTLEQELGATKKALGDALTRQVELEGQIDKKKKKKKLFRFHW 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07989 604 Gene3D - 166 374 IPR036865 -
Mepo3g07989 604 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 175 349 IPR001251 -
Mepo3g07989 604 Pfam CRAL/TRIO domain 181 343 IPR001251 -
Mepo3g07989 604 CDD SEC14 173 344 IPR001251 -
Mepo3g07989 604 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 18 594 - -
Mepo3g07989 604 SMART CRAL_TRIO_N_2 94 119 IPR011074 -
Mepo3g07989 604 FunFam SEC14 cytosolic factor 166 374 - -
Mepo3g07989 604 Pfam CRAL/TRIO, N-terminal domain 85 118 IPR011074 -
Mepo3g07989 604 Gene3D - 63 156 IPR036865 -
Mepo3g07989 604 SUPERFAMILY CRAL/TRIO domain 174 371 IPR036865 -
Mepo3g07989 604 SMART sec14_4 175 346 IPR001251 -
Mepo3g07989 604 SUPERFAMILY CRAL/TRIO N-terminal domain 66 132 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07989 Mepo-Chr3 92721404 92726695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07989 73 340 Acyl Lipid Metabolism Gene Families AT5G47730 25.818 3.10e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07989 K26544 - gmx:100802579 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07989 3 92721404 92726695 Mepo3g07989 3 92721404 92726695 ECH