Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07922 ATGAAGCATATGTTCTTTCTATTTTTCTTAGTTCTCTATGTGATCTCACTACTCAACGTAGAAGCAGAAGATGAGTTTGTCAAAACAAGAGGAGTGCAGCTTATGCTGAACGGGAGCCCTTATTATGCCAATGGTTATAATGCATATTGGTTAATGTATTTTGCTTCTGATCTATCTCAAAGGAACAAAGTATCATCAACTTTTCAAGAGGCTTCAAATCATGGACTTAACATAGCAAGAACTTGGGCTTTCAGTGATGGTGGTTATAAACCCCTTCAATACTCTCCTGGATCCTACAATGAGGAAATGTTCCAGGGGTTGGACTTTGTACTAGCTGAAGCCAGAAAATATGGGATCAAGGTAATTTTGAGTTTGGTAAACAACTATGAGAATTTTGGAGGGAAGAAACAATATGTGGAGTGGGCAAGGAGTCAAGGCCAGTCCATAAACTCTGAAGATGATTTCTTCACTAATCCTGTTGTCAAGGGATACTATAGAAATCACATTAAGACAGTGCTTACAAGACGCAACAGCCTGAGTGGAGTTGCTTACAAAGACGACCCTACAATAATGGCTTGGGAGCTTATGAATGAGATTAGGTGCCCTTCAGATCACTCAGGAAATTCAGTTCAGAGTTGGATTAGTGAGATGGCATCTTACTTGAAATCCATAGATGGAAACCACTTGGTTGAAGCTGGTTTGGAGGGTTTCTATGGGCAGTCAAAGACAGAGTCTAATCCTAACTTCCAAGTAGGAACCGATTTCATTGCAAACAACCAAATCCCCACCATCGATTTTGCTACACTACACTCCTACCCGGATCAATGGCTATCTAATTCAGGCTATGAAGATCAAATATCTTTCTTACGTGGCTGGCTCAATGAGCATATCCAAGATGCACAGAACATCCTTCACAAGCCACTTCTATTTGCAGAGTTTGGCATTTCATCTAAAAACTTGGGCAGCCGCAATAACTCAACAAAGAGGGATCAGTTTTTCAATACTGTATATTCAGCAATATATTCATCAGCAAGTGGTGGTGGAACTGCTGTTGGTGGCTTATTTTGGCAACTTCTTGCTGAAGGAATGGACTCTTTCCGAGACGATTACGAGGTGATACTAGCCGAGAGTCCCTCAACAGCTACCTTGATTGCTCAAGAGTCTCAAAAGCTCAAGCGAATTCGCAAGATGTATGCCAGACTCAAAAACATTGACAAGTGGAACAAGACATAG 1233 0.4104 MKHMFFLFFLVLYVISLLNVEAEDEFVKTRGVQLMLNGSPYYANGYNAYWLMYFASDLSQRNKVSSTFQEASNHGLNIARTWAFSDGGYKPLQYSPGSYNEEMFQGLDFVLAEARKYGIKVILSLVNNYENFGGKKQYVEWARSQGQSINSEDDFFTNPVVKGYYRNHIKTVLTRRNSLSGVAYKDDPTIMAWELMNEIRCPSDHSGNSVQSWISEMASYLKSIDGNHLVEAGLEGFYGQSKTESNPNFQVGTDFIANNQIPTIDFATLHSYPDQWLSNSGYEDQISFLRGWLNEHIQDAQNILHKPLLFAEFGISSKNLGSRNNSTKRDQFFNTVYSAIYSSASGGGTAVGGLFWQLLAEGMDSFRDDYEVILAESPSTATLIAQESQKLKRIRKMYARLKNIDKWNKT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07922 410 Gene3D Glycosidases 22 395 - -
Mepo3g07922 410 FunFam Mannan endo-1,4-beta-mannosidase 6 23 395 - -
Mepo3g07922 410 SUPERFAMILY (Trans)glycosidases 26 382 IPR017853 -
Mepo3g07922 410 Pfam Cellulase (glycosyl hydrolase family 5) 54 332 IPR001547 GO:0004553|GO:0071704
Mepo3g07922 410 Coils Coil 384 404 - -
Mepo3g07922 410 PANTHER - 6 409 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07922 Mepo-Chr3 92216817 92220562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07922 26 410 Glycoside Hydrolase AT5G66460 64.433 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07922 K19355 - gmx:100794126 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07922 3 92216817 92220562 Mepo3g07922 3 92216817 92220562 ECH