LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g07921	ATGGATTCAGCAATAGCTTCAACTTATGCATCATCCCTCAGTACCAATCTAAGCAAAATTAGTATTGAAGGAGTTGGAAGAAGAACCAGAAACAACAGTGTGTTCTTAGGTGAAACTAGTAAGGGAAGTTTAAGCACAACAAGATTCCTTACCATTCAATCACCCAAATCATTCAATCCTAAAAATGGAGCTTCACAAAACGTTCTCACTTCAGGGATCAATGATTATCAAGACTCCACGACATTTCAAGAGGGACCCTATTTTGAGACTCCAAAAGCAGACCCAAAAAGTGTAGCTTCAATCATTTTGGGTGGTGGTGCCGGAACTCGCCTTTTTCCTCTTACTAGCAAAAGAGCCAAACCTGCGGTTCCGATTGGAGGGTGTTACAGACTCATAGATATCCCTATGAGCAATTGCATCAACAGTGGCATTAGAAAAATATTCATTTTAACACAGTACAATTCTTTCTCTCTCAACCGTCACTTGTCTCGCGCCTACAATTTCGGAAATGTCTCCACTTTTGGGGAGGGTTTTGTGGAGGTATTGGCTGCAACTCAAACTTCTGGAGAAGCTGGGAAGAAATGGTTCCAAGGAACAGCTGATGCTGTGAGGCAATTTATATGGGTTTTTGAGGATGCTAAGAACAAGAATGTTGAGCATATATTGATACTTTCTGGTGATCATCTTTACCGAATGAACTATATGGATTTTGTGCAGAAACATATCGACACAAATGCTGATATCACAGTTTCGTGTCTTCCCATGGATGACAGTCGAGCATCAGATTATGGGTTGATGAAAATTGACGAAACAGGTCGCATTATACAGTTTGCAGAAAAGCCCAAGGGATCAGATTTGAAAGCAATGCATGTTGATACCACTGTTCTTGGGTTATCTCAAGAAGAAGCAAAGAAACATCCATATATTGCGTCCATGGGTGTTTACGTGTTTCGAACTGAGACCCTACTGGAACTATTAAAATTGAACGGTTCTACATGCAATGACTTTGGATCTGAAATCATCCCATCTGCTGTTAGTGGGCATAATGTCCAGGCATTTTTGTTCAATGACTACTGGGAAGATATTGGAACCATAGAGTCCTTCTTTGATGCAAATTTGGCCCTAACAGAACCTGATCCAAAATTTCAATTCTATGATCCAAAGACACCTTTCTTCACTTCCCCGAGATTCCTACCACCTACTAAAGTAGAAAAATGCAAGATTGTGGATGCAATTATTTCTCACGGTTGCTTCTTGAGGGAGTGTAGTGTTCAACATTCTATTGTTGGAATACGATCACGTTTAGAGTCTGGTGTGGAGCTTCAGGATACCATGATGATGGGTGCTGATTACTATCAAACTGAGTCTGAAATTGCATCTCTGCTGGCAGAAGGAAAGGTGCCCGTTGGTGTTGGAGAAAATACCAAAATCAGGAATTGTATAATTGACAAGAATGCAAGAATTGGAAGAAATGCAATCATTACAAATGCAGATGGTGTTGAAGAAGCTGACAAAACTAAGGAAGGGTTTTACATTAGGTCGGGCATCACCGTTATACTGAAGAATGCAACAATTCAAGATGGAACAGTTATATGA	1596	0.4029	MDSAIASTYASSLSTNLSKISIEGVGRRTRNNSVFLGETSKGSLSTTRFLTIQSPKSFNPKNGASQNVLTSGINDYQDSTTFQEGPYFETPKADPKSVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQYNSFSLNRHLSRAYNFGNVSTFGEGFVEVLAATQTSGEAGKKWFQGTADAVRQFIWVFEDAKNKNVEHILILSGDHLYRMNYMDFVQKHIDTNADITVSCLPMDDSRASDYGLMKIDETGRIIQFAEKPKGSDLKAMHVDTTVLGLSQEEAKKHPYIASMGVYVFRTETLLELLKLNGSTCNDFGSEIIPSAVSGHNVQAFLFNDYWEDIGTIESFFDANLALTEPDPKFQFYDPKTPFFTSPRFLPPTKVEKCKIVDAIISHGCFLRECSVQHSIVGIRSRLESGVELQDTMMMGADYYQTESEIASLLAEGKVPVGVGENTKIRNCIIDKNARIGRNAIITNADGVEEADKTKEGFYIRSGITVILKNATIQDGTVI	531

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g07921	531	NCBIfam	glucose-1-phosphate adenylyltransferase	99	495	IPR011831	GO:0005978\|GO:0008878
	Mepo3g07921	531	CDD	ADP_Glucose_PP	101	362	-	-
	Mepo3g07921	531	SUPERFAMILY	Trimeric LpxA-like enzymes	393	531	IPR011004	-
	Mepo3g07921	531	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	310	320	IPR005836	GO:0005978\|GO:0008878
	Mepo3g07921	531	FunFam	Glucose-1-phosphate adenylyltransferase	397	531	-	-
	Mepo3g07921	531	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	104	123	IPR005836	GO:0005978\|GO:0008878
	Mepo3g07921	531	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	98	492	IPR029044	-
	Mepo3g07921	531	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	54	531	IPR011831	GO:0005978\|GO:0008878
	Mepo3g07921	531	FunFam	Glucose-1-phosphate adenylyltransferase	80	396	-	-
	Mepo3g07921	531	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	87	396	IPR029044	-
	Mepo3g07921	531	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	195	203	IPR005836	GO:0005978\|GO:0008878
	Mepo3g07921	531	CDD	LbH_G1P_AT_C	399	525	-	-
	Mepo3g07921	531	Gene3D	Hexapeptide repeat proteins	397	531	-	-
	Mepo3g07921	531	Pfam	Nucleotidyl transferase	100	376	IPR005835	GO:0009058

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g07921	Mepo-Chr3	92212414	92217247	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g07921	K00975		-	gmx:100793757	852.432

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g07921	3	92212414	92217247	Mepo3g07921	3	92212414	92217247	ECH