Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07896 ATGGGAAATTCCAGTTATACCCTCTCCCTCAACGCTTTCGCAGATCTTACACACCATGAATTCAAGACCACTCGTCTAGGCTTTTCACCTTCTTCGTTGTTAAGATTCAAATTCAACCACTTTGAAGATCAACAATTCGATGATAATGGTGTTTTAGAAGCTCCTTCTGAGATTGATTGGAGAAAGAGTGGTGCTGTTACTTCTGTCAAAGACCAAGGAAGCTGTGGTGCTTGTTGGTCATTTTCGGCTACCGGTGCTATCGAAGGGATAAATAAAATTGTGACAGGGTCTCTTGTGAGCCTTTCTGAACAAGAATTGGTAGATTGCGATAGAACTTATAATAGTGGTTGTGATGGTGGACTCATGAACTATGCATACCAATTTATCATTGACAACAAGGGGATTGACACCGAGGAAGATTACCCGTATCAAAGTCGTCAACTACTTTGCAAAAAAGACAAGTTAAAAAGGCATGTTGTTACGATTGATGGTTATACTGATGTGCCTCCAAATGACGAAAAAAAACTACTAAAGGCTGTTGCAGTCCAACCTGTTAGCGTAGGCATATGCGGTAGTGCAAGGGCTTTCCAGCTATACTCAAAGGGTATCTTCACTGGACCATGTTCAACTTATTTGGACCATGCAGTGTTGATTGTAGGATATGGTTCGGAAAACGGAGTAGATTATTGGATTGTAAAAAATTCTTGGGGAAAATCTTGGGGAATGAATGGTTACATACACATGTTGCGAAACACTGACAATTCTGCCGGGTTATGTGGAATCAACATGTTAGCTTCATATCCAGCCAAGACCAGCCCCAATCCTCCTGTCCCACCTCCACCAGGTCCTATAAGGTGTAATTTGTTTACTTACTGTTCAAGAGGGGAAACATGTTGTTGTGCCAAGAAATTTCTTGGAATATGTTTCTCTTGGAAATGCTGTGGTAAAACTTCTGCCGTATGTTGTAAGGATAAGCGTCACTGTTGTCCTCTAGATTATCCGATTTGCGACACAGGAAGGGGCCAATGTCTTAAGAGAATTGCAAATAGGACGGCAACAATGCCATCCGATAAAGAAGATACTTTCCATCAGACAAGGGATTGGAGTTCTCATTGA 1116 0.4149 MGNSSYTLSLNAFADLTHHEFKTTRLGFSPSSLLRFKFNHFEDQQFDDNGVLEAPSEIDWRKSGAVTSVKDQGSCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDRTYNSGCDGGLMNYAYQFIIDNKGIDTEEDYPYQSRQLLCKKDKLKRHVVTIDGYTDVPPNDEKKLLKAVAVQPVSVGICGSARAFQLYSKGIFTGPCSTYLDHAVLIVGYGSENGVDYWIVKNSWGKSWGMNGYIHMLRNTDNSAGLCGINMLASYPAKTSPNPPVPPPPGPIRCNLFTYCSRGETCCCAKKFLGICFSWKCCGKTSAVCCKDKRHCCPLDYPICDTGRGQCLKRIANRTATMPSDKEDTFHQTRDWSSH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07896 371 CDD Peptidase_C1A 55 268 IPR039417 -
Mepo3g07896 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 72 83 IPR000169 -
Mepo3g07896 371 Gene3D Granulin 283 353 IPR037277 -
Mepo3g07896 371 SMART GRAN_2 286 343 IPR000118 -
Mepo3g07896 371 SMART pept_c1 54 269 IPR000668 GO:0006508|GO:0008234
Mepo3g07896 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 229 248 IPR025661 -
Mepo3g07896 371 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 10 263 IPR013128 GO:0008234
Mepo3g07896 371 Pfam Granulin 297 344 IPR000118 -
Mepo3g07896 371 Pfam Papain family cysteine protease 55 268 IPR000668 GO:0006508|GO:0008234
Mepo3g07896 371 SUPERFAMILY Granulin repeat 283 315 - -
Mepo3g07896 371 FunFam Senescence-specific cysteine protease 1 270 - -
Mepo3g07896 371 SUPERFAMILY Cysteine proteinases 5 270 IPR038765 -
Mepo3g07896 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 212 222 IPR025660 -
Mepo3g07896 371 FunFam Cysteine protease 1 283 346 - -
Mepo3g07896 371 PRINTS Papain cysteine protease (C1) family signature 72 87 IPR000668 GO:0006508|GO:0008234
Mepo3g07896 371 PRINTS Papain cysteine protease (C1) family signature 229 235 IPR000668 GO:0006508|GO:0008234
Mepo3g07896 371 PRINTS Papain cysteine protease (C1) family signature 214 224 IPR000668 GO:0006508|GO:0008234
Mepo3g07896 371 Gene3D Cysteine proteinases 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07896 Mepo-Chr3 92003182 92006394 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07896 - - tpra:123897636 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07896 3 92003182 92006394 Mepo3g07896 3 92003182 92006394 ECH