Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07874 ATGAGCAAAAGAGCGGCACCTGATCCTGTGGCAGTTCTACGCGGCCACCGTGCTTCCGTCACTGATATTTGTTTTCATCCCTCTAAGCCTATCTTATTCTCAGGTTCCGCTGACGGTGAACTGCGAATTTGGGATACATTTCGCCGTCAAACTCTTTCATCAGCATGGTTACACAGTGCTGCACATGGGATTCTTGCTCTTGCCAGTAGTTCTTCACTTGGGACTAATAAATTTGTCAGCCAGGGTAGAGATGGAACTGTCAAAGTTTGGGATTTTGATGATACTGGTTTGTCCAGGATTCCATCAGTTACAATCAAGACAAACAGTTATCACTTTTGTAAATTTTCCGTGGCTAAGAATCAGAGTATCGGGTCAAAAGCAGGGGAAGCATCAAAAGATTGCCTTGAAACAGAAGAGGCTCATACTAATCAAAGTTGTTCTGAAAGCTCTGAAGGGCTATCATATGTGGCTTTGTCGGGGGAGAACTCTTCTGAGGTTGAAATTTGGGATCTCAAGTCAGCTGAAAGATTTGCACGTCTCCCTTCAAATATTGGTAGTAACTCTTCAAGTGTTAGCAGCAAAGGCATGTGCATGGCACTTCAATTGTGTGTACCATCTGAATCACAAGGATTTTTAAATGTCATGGCTGGATATGAAGATGGTACCATGCTTTGGTGGGATGTACGGAATCCTGGAGTTCCATTAAGTTCTGTGAAATTCCATTCTGAGCCAGTTCTGAGCATTGGTATTGACGAGTCTTGCAAAGGGGGTATCTCGGGAGCTGCAGATGAGAGGATTGTGATGTACAGCTTGGATCATTCTTCGGGTACATGCGTGGTCAATAAAGAAATCACATTGGAGCGACCTGGCATCTCAGGCACCTCAATTCGGCCTGATGGCAAAATTGCTGCAACTGCTGGCTGGGACCACAGAATACGGATATATAATTACCGCAAAGGAAACGCCTTAGCTGTACTTAAGTATCATCATGCCACGTGCAATGCGGTAACTTTTTCATCTGATTGTAAACTTATGGCCTCTGCATCAGCCGACACAACTGTGGCGCTGTGGGAATTGTATCCTCCAAGAATGATGTATTAG 1101 0.445 MSKRAAPDPVAVLRGHRASVTDICFHPSKPILFSGSADGELRIWDTFRRQTLSSAWLHSAAHGILALASSSSLGTNKFVSQGRDGTVKVWDFDDTGLSRIPSVTIKTNSYHFCKFSVAKNQSIGSKAGEASKDCLETEEAHTNQSCSESSEGLSYVALSGENSSEVEIWDLKSAERFARLPSNIGSNSSSVSSKGMCMALQLCVPSESQGFLNVMAGYEDGTMLWWDVRNPGVPLSSVKFHSEPVLSIGIDESCKGGISGAADERIVMYSLDHSSGTCVVNKEITLERPGISGTSIRPDGKIAATAGWDHRIRIYNYRKGNALAVLKYHHATCNAVTFSSDCKLMASASADTTVALWELYPPRMMY 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07874 366 ProSitePatterns Trp-Asp (WD) repeats signature. 345 359 IPR019775 -
Mepo3g07874 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 13 45 - -
Mepo3g07874 366 PANTHER TRANSDUCIN BETA-LIKE 3 5 359 - -
Mepo3g07874 366 Gene3D - 136 364 IPR015943 GO:0005515
Mepo3g07874 366 SUPERFAMILY WD40 repeat-like 9 358 IPR036322 GO:0005515
Mepo3g07874 366 PRINTS G protein beta WD-40 repeat signature 78 92 IPR020472 -
Mepo3g07874 366 PRINTS G protein beta WD-40 repeat signature 345 359 IPR020472 -
Mepo3g07874 366 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Mepo3g07874 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 326 366 - -
Mepo3g07874 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 326 366 IPR001680 GO:0005515
Mepo3g07874 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 54 IPR001680 GO:0005515
Mepo3g07874 366 Pfam WD domain, G-beta repeat 323 357 IPR001680 GO:0005515
Mepo3g07874 366 Pfam WD domain, G-beta repeat 295 316 IPR001680 GO:0005515
Mepo3g07874 366 Pfam WD domain, G-beta repeat 9 45 IPR001680 GO:0005515
Mepo3g07874 366 Gene3D - 2 102 IPR015943 GO:0005515
Mepo3g07874 366 SMART WD40_4 319 358 IPR001680 GO:0005515
Mepo3g07874 366 SMART WD40_4 277 316 IPR001680 GO:0005515
Mepo3g07874 366 SMART WD40_4 231 270 IPR001680 GO:0005515
Mepo3g07874 366 SMART WD40_4 131 170 IPR001680 GO:0005515
Mepo3g07874 366 SMART WD40_4 6 45 IPR001680 GO:0005515
Mepo3g07874 366 SMART WD40_4 48 91 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07874 10 92 Miscellaneous Gene Families AT5G08390 32.530 6.07e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07874 K24770 - gmx:100800482 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07874 3 91785265 91791101 Mepo3g07874 3 91785265 91791101 ECH