Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07872 ATGTCTACATCAGAAGTTGAGAAGAAGGTCGAGGAAGAGAATCAAGCTCCTAAAGGAGGTGAACTCTTGTTCTGTGGTGCCACGTGTTGGGATATCGTTGGTCGTCGCAAAGGTCCTGCTGAGGGTAATTTGGTCTCTCCTTCCCGCCTCCGTCCTCTCGTCGGCATCAGCATTCGTTCCGTTGCATCCGGCTGCGCATCGTGTCATTGCGTGGCATTGGACGTTGAAGGGCGTTGCTATACATGGGGGCGTAATGAGAAAGGGCAACTGGGTCATGGAGATACCATTCAGCGTGATAGGCCAACTGTGGTTTCTGAACTTTCAAAATACAAAATTGTTCAAGCTGGAGCTGGGAAGAGCCATACCGTAGTTGTTACAGAGGATGGAAATTCCCTAGCATTTGGATGGAACAAACATGGACAGCTAGGTTCCGGTTCTGCAAAAACTGAAATTGAATCATCTCCTATTCGCTGTCTCGTGTCTGAAGTTACATATGCTACATGTGGTGGCGACTTTTCTGTGTGGCTATCTTCAGTCGAAGGATCTTCTATACTGACTGCTGGGCTTCCACAATATGGGCAGCTTGGGCATGGAACAGATAACGAGTATAATTCCAAAGACAGTTCTGTGAAATTAGTTTATGAAGCACAGCCACGTCCTCGAGCAATAGCTTCCCTTGCTGGGGAAACCATTGTCAAGGTGGCGTGTGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTTTGTCTACACGTGGGGTTATGGTGGTTATGGAAGGCTAGGACATCGGGAGCAGAAGGATGAATTCGCTCCACGCCGTGTTGATATTTTCACGAATAGAAACGTGTTGCCTCCTGATGCAATTATTTCAGCAGGTTCTGTGAATTCTGCTTGTACTGCAGCTGGAGGGCAGCTGTACATGTGGGGCAAAATAAAGAACACTGGTGATGACTGGATGTACCCTAAGCCTCTAATGGATTTAAGCGGCTGGAATATACGATGCATGGATTCAGGGGGTATGCACCATTTTGTTGGGGCTGATTCCTCGTGCATAAGTTGGGGTCATGCTCAGAATGGAGAGCTGGGATACGGACCTAATGGACAGAAGTCTTCAGCTGTTCCCAAGAAGGTGGATATACTTGAGGGTATGCATGTAATGAGTGTTGCTTGTGGTTTGGGTCATTCCATGGTTGTGGTTGACAGATCAAATATTGCTGATAGACTTGACCAGCTTGATACACATGATGGCAAAGCTGTTGGTGAAGGTAATGAGACCGTGAGCAAAACTCAAGTGCCTAAAAAGGCGGCTCCAAAAAAAGGTGCAAAGAAAGCTGACAGCTCAAAGAAGAGGAAACAAGCAAAAGATGCATCTGACTCAGAAGAAGAGCAAGAAGAGGCTGAAGAAAGTGACAATAGCGAGGATGAAGTTAATGGTGAGGCTGAGGTTAAAACATCACGTGGTGGAAAAAGTTCTGGCAAGGGCCGAGGTAAGGCATCCAAAGTGTCGGAGTCTGAGGGTAAAGGCTCTGGCCGAGGACGCGGTCGCGCTCCTGCAAATAACAGCAGTTCAAAATCTTCTCCAGTTAAGTCAACCGGTAAGAGAGGAAGACCCAGAAAGTCATGA 1626 0.4742 MSTSEVEKKVEEENQAPKGGELLFCGATCWDIVGRRKGPAEGNLVSPSRLRPLVGISIRSVASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVQAGAGKSHTVVVTEDGNSLAFGWNKHGQLGSGSAKTEIESSPIRCLVSEVTYATCGGDFSVWLSSVEGSSILTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEAQPRPRAIASLAGETIVKVACGTNHTVAVDKNGFVYTWGYGGYGRLGHREQKDEFAPRRVDIFTNRNVLPPDAIISAGSVNSACTAAGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNIRCMDSGGMHHFVGADSSCISWGHAQNGELGYGPNGQKSSAVPKKVDILEGMHVMSVACGLGHSMVVVDRSNIADRLDQLDTHDGKAVGEGNETVSKTQVPKKAAPKKGAKKADSSKKRKQAKDASDSEEEQEEAEESDNSEDEVNGEAEVKTSRGGKSSGKGRGKASKVSESEGKGSGRGRGRAPANNSSSKSSPVKSTGKRGRPRKS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07872 541 PRINTS Chromosome condensation regulator RCC1 signature 250 264 IPR000408 -
Mepo3g07872 541 PRINTS Chromosome condensation regulator RCC1 signature 78 94 IPR000408 -
Mepo3g07872 541 PRINTS Chromosome condensation regulator RCC1 signature 112 125 IPR000408 -
Mepo3g07872 541 PRINTS Chromosome condensation regulator RCC1 signature 234 250 IPR000408 -
Mepo3g07872 541 PRINTS Chromosome condensation regulator RCC1 signature 131 147 IPR000408 -
Mepo3g07872 541 SUPERFAMILY RCC1/BLIP-II 19 403 IPR009091 -
Mepo3g07872 541 Coils Coil 450 470 - -
Mepo3g07872 541 MobiDBLite consensus disorder prediction 460 476 - -
Mepo3g07872 541 Gene3D - 215 480 IPR009091 -
Mepo3g07872 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 349 402 IPR000408 -
Mepo3g07872 541 Pfam Regulator of chromosome condensation (RCC1) repeat 76 125 IPR000408 -
Mepo3g07872 541 Pfam Regulator of chromosome condensation (RCC1) repeat 185 244 IPR000408 -
Mepo3g07872 541 Pfam Regulator of chromosome condensation (RCC1) repeat 128 174 IPR000408 -
Mepo3g07872 541 Pfam Regulator of chromosome condensation (RCC1) repeat 353 399 IPR000408 -
Mepo3g07872 541 Pfam Regulator of chromosome condensation (RCC1) repeat 247 285 IPR000408 -
Mepo3g07872 541 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 115 125 IPR000408 -
Mepo3g07872 541 PANTHER PROTEIN RCC2 7 516 IPR028641 -
Mepo3g07872 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 248 303 IPR000408 -
Mepo3g07872 541 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 234 244 IPR000408 -
Mepo3g07872 541 Gene3D - 7 214 IPR009091 -
Mepo3g07872 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 129 179 IPR000408 -
Mepo3g07872 541 MobiDBLite consensus disorder prediction 415 541 - -
Mepo3g07872 541 MobiDBLite consensus disorder prediction 439 459 - -
Mepo3g07872 541 MobiDBLite consensus disorder prediction 516 531 - -
Mepo3g07872 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 77 128 IPR000408 -
Mepo3g07872 541 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 247 IPR000408 -
Mepo3g07872 541 MobiDBLite consensus disorder prediction 497 511 - -
Mepo3g07872 541 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 389 399 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07872 Mepo-Chr3 91746620 91753422 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07872 - - gmx:100802977 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07872 3 91746620 91753422 Mepo3g07872 3 91746620 91753422 ECH