Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07838 ATGCATCAAGGTGATTACACCTCCGCTCCATATTACCAATTCCCACACATGCAACAAAACCCAAACCCAATCCCCAATCCTACACCCCCTCAATCCGATCCAATTCCTAATCACTACGCTTCTGCACCCCCTTTCACTCCCAATTACGATTATTCTTCAACCTATTCTCCTTACCCTTCTCATAATCCCGATCATCTTCCTTCCTCCAACCCTAATTTCAATCCTCCTCCTCCTCCTTTCGAATCATCTAACCCCCCTTATCAACCACCTTATTACCCACCCTATGATCATCAACAACATCAAACGCCTCAAAATTATGCACCTCCTAATCCTAACCCTAATCCCAATCCCAATTTATATAATTCAGCTCCGTATTCTGTTCCTCCGATTCCATCATACGAAACCTCATACGATAATCCGGTGAAATCCGATTACGGTGGCGGCGGAGGTGGCGGTGCTTATTTTGATGACAGATACGGAGGAAGTTTTAATCGTAGAAATTCTGATTTGGGATCTGAATTATATGGTAAGCGTCACGATGGTGGTTTGTCAAGGTATGAATCCGGTGGTGGTGATGAAGGTTATGGAGATGGGGTGTATGCTTATGAAGGGGGAAAAGTGGAACCATATGGGGCGCGGGGCACGGCTTCAAAGTCTTCGACTTGGAATTCGTCTTCAACGCCATCTTTTGATGATTTTGGGAGGCCGATTAGTTTTTCTTCTCCGAAAGAATCTTCTGTGGCAAGTAAGATTGTGAAAGCTGTTCCGAAGGTTGATACACAAGATGATGTGAAAAGTGGGGTGCAGAAGTTTCGAGTTAAGCTTTTGGCTGAGAGTGGTGGTCAGAGTACAATGGATGTTCTCTGCCAGGTTGGTTTGGATGGACTTCGCATGCTAGATCCGAATACCAGTCGGACATTGAGAATATATCCTCTCGAGAACATAACCAGATGTGATAGATTCGATTCATCTACCTTTGCATTTTGGTCGAAGAGCCCTGTAGACATTGAGCCAAGACGAATCAGATTACAATCTAATAGTTACACTACGAACACACTTTTGGATACTGTGACTGCTGCAACCATACAGTTCAAGGAAATGGGTGGAAGTAGGAGGCCTGCTGAATCACTTAAAACAAATGAACAGCCTGCCGAAAGAAAGAAAGGCCTTGGTGATTGGATGAATATCATAAAACCTGCCAACGAAGAGAAAGATCACTGGGTCCCAGATGAAGCAGTCTCAAAATGTACAGCATGTGGTACTGATTTTGGGGCTTTTATACGCAAGCATCACTGTAGGAACTGCGGTGATATTTTCTGTGACAAATGTACACATGGCAGAATCGCTTTAACAGCTGAGGAGAATGCTCAGCCAGTACGAGTATGCGACCGATGCATGGCAGAAGTGACTCAAAGGCTGAGTAGTGCTAAAGAGTCATCAAATAAACCTCTGTTGCAGAGTCATGAGCATATGGCTCGGAAACTTCAGGAGGAGTTGGAAAGAAATCGGAAGACATCAGGTTCCAAGTCTGACGGATCTGGAAAACGGATGAAGGAAGTTGCATGTCCTATTTGCACTGTCCATCTGCAGGTTCAGGTACCTAGCTCAGGTTCAGAGACCATTGAGTGTGGAGTTTGCCAGCACCCATTTCTTGTGAGTTCTTATTGA 1668 0.4466 MHQGDYTSAPYYQFPHMQQNPNPIPNPTPPQSDPIPNHYASAPPFTPNYDYSSTYSPYPSHNPDHLPSSNPNFNPPPPPFESSNPPYQPPYYPPYDHQQHQTPQNYAPPNPNPNPNPNLYNSAPYSVPPIPSYETSYDNPVKSDYGGGGGGGAYFDDRYGGSFNRRNSDLGSELYGKRHDGGLSRYESGGGDEGYGDGVYAYEGGKVEPYGARGTASKSSTWNSSSTPSFDDFGRPISFSSPKESSVASKIVKAVPKVDTQDDVKSGVQKFRVKLLAESGGQSTMDVLCQVGLDGLRMLDPNTSRTLRIYPLENITRCDRFDSSTFAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRPAESLKTNEQPAERKKGLGDWMNIIKPANEEKDHWVPDEAVSKCTACGTDFGAFIRKHHCRNCGDIFCDKCTHGRIALTAEENAQPVRVCDRCMAEVTQRLSSAKESSNKPLLQSHEHMARKLQEELERNRKTSGSKSDGSGKRMKEVACPICTVHLQVQVPSSGSETIECGVCQHPFLVSSY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07838 555 MobiDBLite consensus disorder prediction 496 515 - -
Mepo3g07838 555 SMART fyve_4 402 471 IPR000306 GO:0046872
Mepo3g07838 555 MobiDBLite consensus disorder prediction 46 68 - -
Mepo3g07838 555 SUPERFAMILY FYVE/PHD zinc finger 405 478 IPR011011 -
Mepo3g07838 555 FunFam Zinc finger, FYVE-type, endofin 397 475 - -
Mepo3g07838 555 Pfam FYVE zinc finger 406 470 IPR000306 GO:0046872
Mepo3g07838 555 MobiDBLite consensus disorder prediction 1 135 - -
Mepo3g07838 555 Gene3D - 254 327 IPR011993 -
Mepo3g07838 555 Coils Coil 485 505 - -
Mepo3g07838 555 MobiDBLite consensus disorder prediction 106 124 - -
Mepo3g07838 555 MobiDBLite consensus disorder prediction 69 93 - -
Mepo3g07838 555 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 475 IPR013083 -
Mepo3g07838 555 SUPERFAMILY PH domain-like 269 333 - -
Mepo3g07838 555 PANTHER PROTEIN FREE1 1 554 IPR045893 GO:0036258|GO:0043130
Mepo3g07838 555 MobiDBLite consensus disorder prediction 20 41 - -
Mepo3g07838 555 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 410 470 IPR017455 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07838 398 471 EF-hand Containing Proteins AT3G14270 36.250 1.28e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07838 - - gmx:100794840 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07838 3 91463835 91469198 Mepo3g07838 3 91463835 91469198 ECH