Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07822 ATGGCATTCATCAAATCAAGGGTAAGCTTTCACTTACACCATTCTCTTTCCCCTTTCTTACCACACACTTTCAGACTATGTTCTTCTTCACCTCTTGTTTCAGAACACGTCACCAATGACAACAACACTCCTCCTCAAAACACAAATCTATCTCCCGAAGACACTCACATAGTCGATAAATTTCACACCATCATCAAAGACCACTACCGCAAAAACCCTAACCCTAACGCCGTTTCACCTTCCCTAAATCTCTCCATACCTGATCTTTCAATCGACTTTTCCAAAATCTTCACTGTTCATTCATTTTCCCCCTCAATCACCCGCCGTGTGATCGAGAAATGCGGCGGTGTCCGCCACGGTATCCCATTTCTCCAATCCCTAGCCTTCTTCAATTGGGCCACCACGCTAGAAGGTTTCCCTTTATCCCCTGAGCCTTACAATGAGATGATTGACCTCGCTGGAAAGCTCAGACACTTTGATTTAGCGTGGCATTTGATCGATCTGATGAAATCGCGCGGGGTTAAAATAACAGTCAGCACGTTCTCTGTTCTTGTAAGGCGATATGTTAGGGCTGGATTGGCTGCCGAGGCGGTGCATGCTTTTAACCGTATGGAAGAATATGGCTGTAAGCCTGATAAGGTTTCATTTTCGATTGTGATTAGTAGTTTATGTAAGAAGAGAAGGGCTAGTGAAGCGCAGTTGTTTTTTGATAGTCTTAAGCATAAGTTTGAACCTGATGTGATAGTTTATACTAGTTTAGTTCATGGTTGGTGTCGTGCTGGTGATATATCGAAAGCAGAGGAGGTTTTCAGTGACATGAAGACGGCTGGTGTAAAGCCTAATGTTTATACTTACAGCATTGTGATTGATTCACTATGTCGATGTGGACAAATCACCCGTGCTCATGATGTTTTCTCTGAGATGATAGATGCTGGTTGTGATCCTAATGTGGTTACTTTTAATAGTCTTATGAGGGTTCATGTGAAAGCTGGTAGGACTGAAAAGGTCTTGCAGGTTTATAATCAAATGAAGAGGCTTGGCTGTGCTGCTGATACGATCAGCTATAATTTCTTAATTGAGAGTCATTGTAAGGATGAGAATCTGGATGAAGCTGTGAAGGTACTTGATACAATGGTTAAGAAAGGGGTTGCTCCTAATGCATCTACTTTCAATTCAATTTTTGGATGCATTGCTGAGTTGCATGATGTGAATGGTGCACATCGGATGTATGCTAAAATGAAGGAACTGAAGTGCATGCCTAATACGCTGACTTATAATATACTTATGAGAATGTTTGCTGACTCAAAATCTATCGATATGGTTCTGAAGTTGAAAAAGGAAATGGATGAGAGTGAAGTTGAACCTAATGTCAATACTTATCGGATTTTGATTTTGATGTTTTGTGAAAAGGGGCACTGGAATAATGCATACAACTTAATGAAGGAGATGGTTGAAGAAAAATGCCTAAAGCCAAATCTGTCGATTTATGAAACGGTTTTGGAGCTGCTGAGGAATGCTGGACAGCTTAAAAAGCATGAAGAGTTGGTCGAGAAGATGGTTGCCAGAGGATTTGTCTCTCCTCGTCCTTTGTAG 1593 0.4137 MAFIKSRVSFHLHHSLSPFLPHTFRLCSSSPLVSEHVTNDNNTPPQNTNLSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPSLNLSIPDLSIDFSKIFTVHSFSPSITRRVIEKCGGVRHGIPFLQSLAFFNWATTLEGFPLSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVKITVSTFSVLVRRYVRAGLAAEAVHAFNRMEEYGCKPDKVSFSIVISSLCKKRRASEAQLFFDSLKHKFEPDVIVYTSLVHGWCRAGDISKAEEVFSDMKTAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNVVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGFVSPRPL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07822 530 PANTHER PPR_LONG DOMAIN-CONTAINING PROTEIN 192 437 - -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 180 212 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 459 492 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 424 457 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 389 422 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 146 177 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 318 351 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 353 387 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 283 317 IPR002885 -
Mepo3g07822 530 NCBIfam pentatricopeptide repeat 248 282 IPR002885 -
Mepo3g07822 530 SUPERFAMILY TPR-like 216 485 IPR011990 GO:0005515
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 386 420 IPR002885 -
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 281 315 IPR002885 -
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 246 280 IPR002885 -
Mepo3g07822 530 Gene3D Tetratricopeptide repeat domain 314 402 IPR011990 GO:0005515
Mepo3g07822 530 Gene3D Tetratricopeptide repeat domain 110 233 IPR011990 GO:0005515
Mepo3g07822 530 Gene3D Tetratricopeptide repeat domain 403 528 IPR011990 GO:0005515
Mepo3g07822 530 Gene3D Tetratricopeptide repeat domain 234 313 IPR011990 GO:0005515
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 351 385 IPR002885 -
Mepo3g07822 530 Pfam PPR repeat family 420 468 IPR002885 -
Mepo3g07822 530 Pfam PPR repeat family 245 294 IPR002885 -
Mepo3g07822 530 Pfam PPR repeat family 186 225 IPR002885 -
Mepo3g07822 530 Pfam PPR repeat family 351 395 IPR002885 -
Mepo3g07822 530 Pfam PPR repeat 318 348 IPR002885 -
Mepo3g07822 530 Pfam PPR repeat 146 174 IPR002885 -
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 421 455 IPR002885 -
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 142 176 IPR002885 -
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 456 490 IPR002885 -
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 316 350 IPR002885 -
Mepo3g07822 530 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07822 146 527 Glycosyltransferase AT1G05670 29.243 2.90e-55 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07822 - - gmx:100800850 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07822 3 91330667 91333343 Mepo3g07822 3 91330667 91333343 ECH