Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07707 ATGTCTCCTCCTACACCTTCATTCCTTCTTTTCCTTTCTCTATTCGCCATTGCTCTCTCTTTTACCGACTCACAATCCTTCGTCGGCGTTAACTATGGTCAGACCGCCGACAATCTTCCACCACCGGAAGCCACTGCCAAGCTTCTCCAATCCACCACTATCGGAAAAGTACGTATCTACGGCGCCGATCCCGCAATCATAAAATCCCTTGCTATTTCCGGCATCGAAATTGTCATCGGGGCCGCAAACAACGACATTCCAAGTCTAGCTTCTGATCCTAACGCCGCAACTCAATGGATAAACACAAACGTCTTGCCTTATTACCCTGCCAGTAACATCACTCTCATCACCGTCGGTAACGAGGTTTTAACTTCCGGTGATCAAGGACTTGTTTCACAGCTCATGCCGGCGATTCGAAATGTCCAAACTGCTCTCAGCTCGGTGAAGCTCGGCGGAAAGGTGAAGGTATCCACCGTACATTCCATGGCGGTGTTGTCTCAGTCGGATCCACCTTCGTCCGGGTTGTTTAACCCGGCGTTACGAAATACGTTGAATCAGTTGTTGGCGTTTCTGAAGGATAATAAATCGCCGTTTACGGTTAATCCGTATCCGTTTTTTGCTTACCAGAGTGATCCAAGACCCGAAACGCTTGCGTTCTGTTTATTTCAACCGAATTCGGGTCGGGTTGACTCGGGTAACGGAAAACTCTATACCAACATGTTCGATGCTCAGGTTGATGCTGTGCATTCTGCACTGAGTGCTATGAGCTATGAGATCATTGAGATTGTGGTTGCTGAGACAGGATGGCCTTCTAGCGGGGACAGCAATGAAGTAGGACCAAGTGTTGAAAACGCCAAGGCCTATAATGGCAACCTTATTACTCATCTTAGATCATTAGTTGGTACCCCTTTGATACCTGGAAAGTCTGTGGACACTTATATTTTTGCACTCTATGATGAAAACCTCAAACCTGGCCCAGGTTCTGAACGCGCCTTCGGCCTTTTCAAAACCGATCTTACCGTGTCATATGATGTTGGCTTGGCCAGGTCTAGCCAGCAGAATCCACCATCAACTAGTCCAGTTACTCCAGCACCTATCACTTCTGCTGGATGGTGTGTTCCTAAGGCAGGAGTCTCTGATGCACAGTTGCAAAACAATATTGACTATGCATGTAGCCAAGGCATAGATTGTGGGCCAATACAACCAGGAGGAGCATGTTTTGAACCCAACACGGTAGCATCCCATGCTGCCTTTGTAATGAATCTTTACTACCAAACGTTTGGCAGAAATCAATGGAACTGTGATTTCTCTCAAACAGCAACACTCACATCCCAAAATCCAAGTTACAATGCTTGCAATTACGCAGGTGGGAATACCTGA 1380 0.4703 MSPPTPSFLLFLSLFAIALSFTDSQSFVGVNYGQTADNLPPPEATAKLLQSTTIGKVRIYGADPAIIKSLAISGIEIVIGAANNDIPSLASDPNAATQWINTNVLPYYPASNITLITVGNEVLTSGDQGLVSQLMPAIRNVQTALSSVKLGGKVKVSTVHSMAVLSQSDPPSSGLFNPALRNTLNQLLAFLKDNKSPFTVNPYPFFAYQSDPRPETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSAMSYEIIEIVVAETGWPSSGDSNEVGPSVENAKAYNGNLITHLRSLVGTPLIPGKSVDTYIFALYDENLKPGPGSERAFGLFKTDLTVSYDVGLARSSQQNPPSTSPVTPAPITSAGWCVPKAGVSDAQLQNNIDYACSQGIDCGPIQPGGACFEPNTVASHAAFVMNLYYQTFGRNQWNCDFSQTATLTSQNPSYNACNYAGGNT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07707 459 FunFam glucan endo-1,3-beta-glucosidase 7 366 455 - -
Mepo3g07707 459 Gene3D - 365 456 - -
Mepo3g07707 459 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Mepo3g07707 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 443 IPR044965 GO:0004553|GO:0005975
Mepo3g07707 459 Pfam X8 domain 371 441 IPR012946 -
Mepo3g07707 459 Pfam Glycosyl hydrolases family 17 28 345 IPR000490 GO:0004553|GO:0005975
Mepo3g07707 459 FunFam Glucan endo-1,3-beta-glucosidase 14 26 353 - -
Mepo3g07707 459 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Mepo3g07707 459 Gene3D Glycosidases 27 354 - -
Mepo3g07707 459 SMART X8_cls 370 454 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07707 Mepo-Chr3 90396356 90400913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07707 22 454 Miscellaneous Gene Families AT2G16230 66.282 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07707 - - gmx:100810568 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07707 3 90396356 90400913 Mepo3g07707 3 90396356 90400913 ECH