Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07671 ATGACTAAGAGACCAAAGAAATCAGAATCAAATAGGAGACCAAAAAGAAGAAAGCCACCAGGTGTTTTTTCACCGTTGGATGTATCTTCTAGCGTCGTTTTCCGTTTGCTATGTCCTGCTAGTAAAATTGGGGGTGTAATTGGTAAAGGTGGTTCTATTATATCACAAATTCGCCATGAAACCGGTGTGAAAGTTAAGATTGAAGAGCCTGTTCCAGGCTGCGAAGAAAGGGTTATAACTTTTTTAAAAGAGAGTGAAGAAGGTAGTGCTGAGCAAGGAAAGGAGGTTAATGATAATGATGAGAGTGAAAGCAAGGGGAAGGATGATGAGGGGAAAGGGAATGACGATGATAATGAAGATAAAGATTCTGTTTCTGTTGAAGATTCGCAGAGCGAGAAGGTGAATTCGAATCCGACTATTATGAGGGCTGTAATGCTAGTTTTTGAGAGGGTGGCTGAGGATGATGGTGGTGATGAAAGTAAAAAAGGTTACTTTGGTTTAAGGCTACTTATCCTTTCTAATCAAGTTGGATGCATTCTGGGAAAGGGTGGCAGTGTGATAAAGAGAATGTCAGCTGAAAGTGGGGCGCAAATTCGAATCCTTCCTAAAGAAGAAATTCCTGCGTGTGCGTCGGATTCTGACGAGTTAGTTCAGATCACAGGAGGAGTAGAAGTTGTCAAGAGAGCTCTGCAATCTGTTTTTCAGCAGCTTGTGGAGAATTCACCTCGGGATCATGAATCTCTGCCTGCCAATCTTACTGGGCCGTCATCTCATTCATATGGTCAATTCCCACCAAATAAACGCACTTTCGCTGGTCAAGGAGCATCTTTTGCTACTGGGCCTAATGAAATTCCTGTTTTCCATTCTGCTCCTATGATTCCCAAATTTCATGAAGGTGCCATCCTTGGTCGCATGAGGCCTCCACCGGAAATACTTACTTTCCGTTTACTGTGTCCTTCCGAAAGTGTAGGAAATTTAATTGGCAAGGGTGGGTCAATCATAAAGATGCTGCAACAAGAGACAGCCAGTGAAATCAAGGTCATAGAAGCCATTCCGGGTTCAGAGGACTGCATTATCATCATATCTGGTCCAGCGCACCCAGATGATAGAATATCTCCTGTGCAAGAGGCTATATTTCGTGTGCAAAATAGAATATCCAGGGCTACACTTGATAGTAAAGAGCACAGTATGTTAGCAAGGGTCATTGTTTCTTCCAAACATATAGGTTGTCTCCTAGGGAAGGGTGGTTCCATCATAGCTGAAATGAGGAATTTATCAGGTGCCCATATTCGCATGCTGGGAAAGGATAAGGGTCCAAAGTGTGTTTCAGAAGATGATGAAGTAATTCAGGTGAGTGGAGTAATTGAGGCAGTGCATGATGCTCTTTTGCAAATAACTACGAGATTAAGAAACAATTTCTTTCGTGATGCATTTCCGTCTGCCAATTTTCCTTCAAATTCTGCATTCCTGGATCAACATTCTCCATTCCCACCTTATTTGGGAAGGAGGGGACTTTCACCTCCCGGAATGTATTCTGACCTAGGTCCGCGACATCCACATGCTGATTTTCCCCTCGATGATCACCCTCCTTTTATGAATAATATGTATAGATCAGGCATTCCTCCTCTCATATCTGACAGGAAGCCTTGGGGTCCTAAGGGGATACTTGAAGGTGGTGGACACATGGGCTTGCCAGAATTTGCAGGAGGTCCCCGAAGAATTTCTGGATTTGCAGGAGGGAGCCAACCGATTATCACAAGCACCACTGTTGAAGTTGTTGTTCCTCGAGCTCTGGTGGCTGAAATATACGGGGAAAATGGTGAATGCCTGAAACAGATACTCCAGATCTCTGATGCAAATGTTATTATCACTGATCCAAAACCTGGAGCTGTTGAAACTAAAATTATAATATCTGGAACCCCGGAGCAAACTAATGCTGCACAAAGTCTTATTCAGGCATTTGTCATGAGTGAAAGGGAGTCTGGTTGA 1989 0.4334 MTKRPKKSESNRRPKRRKPPGVFSPLDVSSSVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEGSAEQGKEVNDNDESESKGKDDEGKGNDDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFERVAEDDGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVKRALQSVFQQLVENSPRDHESLPANLTGPSSHSYGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAILGRMRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRATLDSKEHSMLARVIVSSKHIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFRDAFPSANFPSNSAFLDQHSPFPPYLGRRGLSPPGMYSDLGPRHPHADFPLDDHPPFMNNMYRSGIPPLISDRKPWGPKGILEGGGHMGLPEFAGGPRRISGFAGGSQPIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPKPGAVETKIIISGTPEQTNAAQSLIQAFVMSERESG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07671 662 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 305 383 IPR036612 GO:0003723
Mepo3g07671 662 CDD KH-I_PEPPER_rpt2_like 398 470 - -
Mepo3g07671 662 CDD KH-I_PEPPER_rpt2_like 168 237 - -
Mepo3g07671 662 MobiDBLite consensus disorder prediction 83 135 - -
Mepo3g07671 662 Gene3D K Homology domain, type 1 28 96 IPR036612 GO:0003723
Mepo3g07671 662 Gene3D K Homology domain, type 1 310 389 IPR036612 GO:0003723
Mepo3g07671 662 CDD KH-I_PEPPER_rpt1_like 312 379 - -
Mepo3g07671 662 MobiDBLite consensus disorder prediction 240 265 - -
Mepo3g07671 662 Gene3D K Homology domain, type 1 586 659 IPR036612 GO:0003723
Mepo3g07671 662 ProSiteProfiles Type-1 KH domain profile. 31 96 - -
Mepo3g07671 662 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 28 81 IPR036612 GO:0003723
Mepo3g07671 662 MobiDBLite consensus disorder prediction 1 19 - -
Mepo3g07671 662 ProSiteProfiles Type-1 KH domain profile. 164 233 - -
Mepo3g07671 662 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 157 239 IPR036612 GO:0003723
Mepo3g07671 662 Gene3D K Homology domain, type 1 165 241 IPR036612 GO:0003723
Mepo3g07671 662 Gene3D K Homology domain, type 1 394 472 IPR036612 GO:0003723
Mepo3g07671 662 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g07671 662 Pfam KH domain 400 465 IPR004088 GO:0003723
Mepo3g07671 662 Pfam KH domain 589 652 IPR004088 GO:0003723
Mepo3g07671 662 Pfam KH domain 313 365 IPR004088 GO:0003723
Mepo3g07671 662 Pfam KH domain 168 231 IPR004088 GO:0003723
Mepo3g07671 662 Pfam KH domain 34 80 IPR004088 GO:0003723
Mepo3g07671 662 SMART kh_6 163 238 IPR004087 GO:0003676
Mepo3g07671 662 SMART kh_6 395 470 IPR004087 GO:0003676
Mepo3g07671 662 SMART kh_6 586 656 IPR004087 GO:0003676
Mepo3g07671 662 SMART kh_6 30 101 IPR004087 GO:0003676
Mepo3g07671 662 SMART kh_6 310 386 IPR004087 GO:0003676
Mepo3g07671 662 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 391 476 IPR036612 GO:0003723
Mepo3g07671 662 MobiDBLite consensus disorder prediction 83 128 - -
Mepo3g07671 662 ProSiteProfiles Type-1 KH domain profile. 311 378 - -
Mepo3g07671 662 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 310 651 - -
Mepo3g07671 662 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 587 656 IPR036612 GO:0003723
Mepo3g07671 662 ProSiteProfiles Type-1 KH domain profile. 396 465 - -
Mepo3g07671 662 ProSiteProfiles Type-1 KH domain profile. 587 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07671 Mepo-Chr3 89982110 89986604 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07671 K21444 - gmx:100785136 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07671 3 89982110 89986604 Mepo3g07671 3 89982110 89986604 ECH