Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07656 ATGGTGGTTTCCGACAGCCCTATCGGTGGCTCTACACCTCCTCTTCCCCCACCGCCACAACAAGAACAAGCTAACAAAGATAGATTCACAAAACCTATCTCAATTGCTGGACCCACCGAAGCTGATCTCAATCGTAACATAGAATTGGAGAAGTTTTTGGTTGATTCGGGGCTTTATGAGTGCAATGAAGAAGCTGCAAGTAGAGAAGAGGTTCTTCGCCGCCTTGATCAGATCGTGAAAAGCTGGGTGAAGCAGCTGACCCGCCAACGAGGCTACACAGATCAGATGGTTGAGGATGCAAATGCTGTCATTTTCACTTTTGGCTCTTACCGACTAGGGGTTCATGGACCTGGAGTGGACATAGACACTTTGTGCATCGGTCCTTCCTATGTAAATCGAGAGCAAGACTTCTTCATCATTTTGCACAACATCCTTGCTGAAATGGAAGAAGTTACTGAACTTCAACCAGTACCTGATGCACATGTCCCAGTAATGAAATTCAAATTCCAGGGAATATCTATAGATTTGCTGTATGCAAGCATATCTATTTTGGTTGTGCCAGAAGACCTGGATATCTCAGACGGTTCCGTTCTGTATGATGTTGATGAACAAACTGTTCGAAGTCTTAATGGTTGCCGAGTGGCGGATCAAATTCTTAAACTTGTTCCAAATGTCGAGCACTTTCGAACTACATTGAGATGTTTAAAGTTTTGGGCTAAAAGACGTGGTGTTTATTCAAATGTTACTGGATTCCTTGGAGGAGTAAATTGGGCTATTTTAGTTGCTCGAATTTGCCAGCTTTACCCTAATGCAATCCCTAGTATGTTGGTTTCTAGATTCTTTAGGGTCTATTCACAGTGGCGGTGGCCAAACCCTGTAATGCTATGCCCTATAGAAGAGAATGAACTGCATTTACCTATATGGGATCCTCGCAGAAACCATAGGGACAGGTATCACCTTATGCCAATAATTACTCCTGCATACCCTTGCATGAATTCCAGCTACAATGTCTCGACAAGCACTCTTCGTGTTATGATGGAACAGTTCTGCTATGGCAACAAGATTTGTGACGAAATTGAGCTTAACAAATCACAGTGGAGTGCACTTTTTCAGCCATATGTCTTTTTTGAGGCTTACAAAAACTATTTACAAGTAGACATCATTGCATTAGATGCTGATGATTTACTTTTGTGGAGAGGTTGGGTAGAATCCCGACTAAGACAGCTAACCTTGAAGATAGAGCGAGATACAAGTGGGATGCTGCAGTGTCATCCTTATCCACATGAGTATGCAGACACGTCCAAGCCTTGTGCGCATTCTGCATTTTTCATGGGCTTGCAAAGAAAAGAGGGAGTAAGAGGTCAAGAGGGACAACAATTTGATATACGTGGAACAGTTGATGAGTTCAGACGAGAAATTATTATGTATGTATACTGGAAGCCGGGAATGGAAATTTATGTTTCTCATGTTCGTCGAAAGCAGCTCCCTGCATTTGTTTTTCCAGAAGGTTACAAACGCACTCGAATGCCTAGGCATATAAACCATGCGGCTGAGAAAATGGGTGATGATACGACAAAGTGCAACTCTGGATCCAGCTCTTCTGAAAGGTCCATCAAGAGGAAGAAGAACCCTGAAATGATGGATGTTAAGCCAGATAAACCAGAGAAGCGGACATCTGTTAGCCCACAGAGGCTAGAGTGTGTTTCACCTGAAAGTTATACTAGTAAATTGGGTGGTACTCCTCACATGAGCATCGAGTGTATTGAAGCGGTTAGGCTAGATGGCTCAACAACGAATGATACCGACAGCAATTGTGAAATCAAGTCATCTGATGGACTCTCAGGAAGTGGTACAATTACTGACGTAGGTGACATGCAGATAAATGAAACAAGTTTTCTTGACTCCACACAGCATAGGCTGAAATCAAGGGCTTTAGAAGTTCAGAATGAGAATGGAGTCAATGAGGACAAAGCTCGGGACATGACTTTTGTTTGCTTGGAAAGGGCAGAAACTATATCTACAAAAAGCTTGCCAAATTGGGAAGAGGGTGCTGTTGGAATTGATCAACAACTAGACAAAGCTTGTAATTTCACAAGGGCAGAATGTTCGGATTATGCACCAATTGCCAGCACCCAGAACCTCAATTGCGAGACAGATGTCAGATTCGGGAGTGTATAA 2178 0.4298 MVVSDSPIGGSTPPLPPPPQQEQANKDRFTKPISIAGPTEADLNRNIELEKFLVDSGLYECNEEAASREEVLRRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREQDFFIILHNILAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISILVVPEDLDISDGSVLYDVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYSQWRWPNPVMLCPIEENELHLPIWDPRRNHRDRYHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFCYGNKICDEIELNKSQWSALFQPYVFFEAYKNYLQVDIIALDADDLLLWRGWVESRLRQLTLKIERDTSGMLQCHPYPHEYADTSKPCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRREIIMYVYWKPGMEIYVSHVRRKQLPAFVFPEGYKRTRMPRHINHAAEKMGDDTTKCNSGSSSSERSIKRKKNPEMMDVKPDKPEKRTSVSPQRLECVSPESYTSKLGGTPHMSIECIEAVRLDGSTTNDTDSNCEIKSSDGLSGSGTITDVGDMQINETSFLDSTQHRLKSRALEVQNENGVNEDKARDMTFVCLERAETISTKSLPNWEEGAVGIDQQLDKACNFTRAECSDYAPIASTQNLNCETDVRFGSV 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07656 725 SUPERFAMILY PAP/OAS1 substrate-binding domain 223 372 - -
Mepo3g07656 725 MobiDBLite consensus disorder prediction 517 566 - -
Mepo3g07656 725 CDD NT_PAP_TUTase 68 222 - -
Mepo3g07656 725 FunFam Poly(A) polymerase alpha, putative 60 216 - -
Mepo3g07656 725 Pfam Poly(A) polymerase predicted RNA binding domain 375 434 IPR007010 GO:0003723|GO:0043631
Mepo3g07656 725 Pfam Poly(A) polymerase predicted RNA binding domain 435 507 IPR007010 GO:0003723|GO:0043631
Mepo3g07656 725 Pfam Nucleotidyltransferase domain 101 177 IPR002934 GO:0016779
Mepo3g07656 725 FunFam Putative poly(A) polymerase gamma 199 370 - -
Mepo3g07656 725 Pfam Poly(A) polymerase central domain 30 371 IPR007012 GO:0043631|GO:1990817
Mepo3g07656 725 Gene3D Poly(A) polymerase predicted RNA binding domain 374 490 - -
Mepo3g07656 725 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g07656 725 Gene3D Beta Polymerase, domain 2 60 216 IPR043519 -
Mepo3g07656 725 FunFam Nuclear poly(A) polymerase 4 374 490 - -
Mepo3g07656 725 Gene3D - 30 370 - -
Mepo3g07656 725 PANTHER POLY A POLYMERASE 18 555 - -
Mepo3g07656 725 MobiDBLite consensus disorder prediction 535 560 - -
Mepo3g07656 725 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 375 500 IPR011068 GO:0003723|GO:0016779|GO:0031123
Mepo3g07656 725 SUPERFAMILY Nucleotidyltransferase 28 221 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07656 Mepo-Chr3 89846233 89852547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07656 K14376 - gmx:100802620 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07656 3 89846233 89852547 Mepo3g07656 3 89846233 89852547 ECH