Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07617 ATGGCCATTTCAAACAATAATAATGCATTTATAGTAAATTGTTGCATTCAGAAAGGGTCTCGTCACTATAACAATATTCCACTCTTCTCTATTTTTAAGTCAAACAAGAGACCAACTCTACCTGAAGTCTCCTTGCAAATTGATGTTCCCAAAATTGTGCAAAATACTGTGGCTAAATTGATCGACGTTTTTGTGGATTCATTCTTTGAATTCATTGACAAGCCATTGCTTCCATCTAAGAGTAACTTTGCTCCTGTGGAAGAGTTGGAGGAAGCCATACTTGTGACTTGCATCCATGGACGAATTCCGAATGATTTTCCAGAGGGTGTCTACATTAGAAATGGACCAAATCCACTTTTTGGTGGACTGAAATCAACAAATTCTATCTTTGGAAGGTCAAGTCATATTTGGGTGGAAGGAGAAGGAATGCTTCATGCATTGTATTTTAAAAAATCAAATCATGGAAGTTGGACAGTCCTCTATAACAACAAGCACGTTGAAACGGAAACATACAAACTTGAAAAACAAAGACATAAACCATTGTTTCTGCCTGCCATAGAAGGCAATTCACTCGCCATTTTGTCTGCTTATCTCTTCAACTGGATGAGATCTGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGAAAGTTTTACTCGGTTGCTGAAAGTCACATGCCACAAGAGATTGATATTTTTTCCTTGAAAACTTTAAACAATTGGGAACTCAGTGCAGTTTGGAATCGACCTTTTACCAGCCATCCAAAGAAAGCTCCAATTACAGGGGAGCTAGTTACATTAGGTGTGGAACCAATTAAACCTTTTGCTGTGGTTGGAATTATTTCTGCCGATGGAAAGAAATTGGTTCATAAAGTTGATATCAAACTAAACAGGTGTAGTCTTTGCCATGACATAGGTGTTACACAAAGGTACAATGTGATCATGGATTTTCCACTAACCATTGATCTAAACAGACTTCTAAGAGGAGGCCAATTAATAAAGTATGATAGGAAAGAATATGCAAGGATTGGGGTAATGCCACGCTATGGCAATGCTAACTCAATCAAATGGTTTGACGTGGAACCTAATTGCACGTTTCACATTATCAATTCTTTTGAGGACGGAGATGAGGTTGTAGTGAGGGGCTGCAGATCTCTTGATTCGTTAATTCCTGAACCTGATCCGAGTTCGAAAGAATTTGAGTGGTTATCTCGTTCTCACGAATGGCGATTGAATATTCAAACCGGAGAGGTTAAGGAGAAAGATCTTTGTGGTGACAAACAAGTTTATATGGATTTTCCTATGATCAATGAAAACTTTATTGGTGTGAAGCATAGATATGCATACACACAAGTAGTCGATCCTATTGCAAGCTCTACCACTCAAGATGTGCCAAAATATAGAGGTTTAGCTAAGCTATACTTAGAAGAATCATGTGCAGAATTCTCTATGTCAAAGAGAGAAAAAGATGAACCTATAAGGATGGAATACCATATGTTTGAGAAGAATACATTTTGCAATGGGGCAGCGTTTGTGCCAAGAGATGAAGGTGTTGAAGAAGATGATGGTTGGATCATTACTTTTGTTCATAATGAAGATACTAACACATCTCAAGTTCATATAATCGATACAAAGAATTTTTCTGGCGAGACGGTTGCCAAAATTGAAATGCCTTGCAGAGTTCCATATGGGTTTCATGGAGCCTTCATGCCGATCTCATTCCAGGATTATTATTAA 1752 0.3784 MAISNNNNAFIVNCCIQKGSRHYNNIPLFSIFKSNKRPTLPEVSLQIDVPKIVQNTVAKLIDVFVDSFFEFIDKPLLPSKSNFAPVEELEEAILVTCIHGRIPNDFPEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHALYFKKSNHGSWTVLYNNKHVETETYKLEKQRHKPLFLPAIEGNSLAILSAYLFNWMRSGKVNKYISNTNVFEHSGKFYSVAESHMPQEIDIFSLKTLNNWELSAVWNRPFTSHPKKAPITGELVTLGVEPIKPFAVVGIISADGKKLVHKVDIKLNRCSLCHDIGVTQRYNVIMDFPLTIDLNRLLRGGQLIKYDRKEYARIGVMPRYGNANSIKWFDVEPNCTFHIINSFEDGDEVVVRGCRSLDSLIPEPDPSSKEFEWLSRSHEWRLNIQTGEVKEKDLCGDKQVYMDFPMINENFIGVKHRYAYTQVVDPIASSTTQDVPKYRGLAKLYLEESCAEFSMSKREKDEPIRMEYHMFEKNTFCNGAAFVPRDEGVEEDDGWIITFVHNEDTNTSQVHIIDTKNFSGETVAKIEMPCRVPYGFHGAFMPISFQDYY 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07617 583 Pfam Retinal pigment epithelial membrane protein 84 576 IPR004294 GO:0016702
Mepo3g07617 583 PANTHER BETA-CAROTENE DIOXYGENASE 90 575 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07617 Mepo-Chr3 89460455 89464830 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07617 - - gmx:100817738 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07617 3 89460455 89464830 Mepo3g07617 3 89460455 89464830 ECH