Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07607 ATGGCATCAATTAGAAGAACCTTGTCTCCTGTTCCTCGAGCCGCAAATGTAGATGTCTGTTCAGTATCTTCCCCGTTGACTAAGTCCTCTCCTAGCCCCCAGAAGTCTATTCCATCCGATGGATTGTTACCTTCTTCATTCACCTCACTGGATTCCAGTGCTTTTTTGCTTGGTTTTTTCTTCCCAAGATCTTTGAGGAATATTGAGAAATCAAAGCCTAAGGGTCAGCTTTGGAGAAAGGTGCTTTTCCATTTTTTCATTTGTTTCATGGTTGGTGTTTCTATTGGCCTCATCCCGCTCGCATCAACCAACTTGTCCTTGAATCTCATGTCAAGAAATCAAGGTTTCTCTTTTGAGGTTATATCCACTGTAAAAAAATTCCAGTCACTCGAAAATGTGAAGATAAATGAGACACCATTAGTTGAGGAGGCTGTGAAGTTTGATGCTACTTTGATTTCTGCAGTACAAGAACAAGAACTAACAGATGGTGTAACGTATAATATATCAGATAGCCAATTCAGTGATGAATCATATTTGGAGTCTCAAAAGCTTCTTATAATTGTCACACCAACTTACAATCATCTATTTCAAGCTTATTATTTGCATCACTTGTCACAAACTTTGAAATTGGTCTCCCCTCCTTTGTTGTGGATTGTTGTTGAGATGAATTCTCAATCTGATGAAACTGCTGACATTTTGACAAGTAGTGGGATTATGTATAGACATCTCATATGCAAAATGAATCTAACCAACACAAGCCATAGGAGCATTCTTATGAGAAATGTTGCAATAGCTCACATTGAAACTCATCGCCTCAATGGAATTGTTTATTTTGCAGACAATGATAACATCTATTCAGTTGAACTCTTCCAGCAAATGAGAGAAATAAGGCGATTTGGAACATGGACTGTTGCAAGATTATCAAAGGATAGACGTGGCATCCTCTTGCAAGGGCCCATTTGTAATGGAAGTGAAGTGATTGGATGGCACTTAAATAATGAATCAGGTGGGAATTCTAAAAGATTTCATGCTGAAATACAAGGCTTCGCCTTCAATAGTACGATACTATGGGATCCAAAGAAGCGGCACCGACCGTCTCTTAAACCTATCAGGCAGCTCGAATCAGTCAAGGAAAATTTGTGGGCTAGCAGATTGATTGAGCAGATTGTTGAAGATGAAAGTGAAATGGAGGGCCTAATGAACGACTGCTCGAGAGTTATGGTTTGGAATATTGATCTTGAGTCATCTTATTCCTTCTATCCTAAAAAATGGATTACAGAGAACAACCTAGACGTCATTTGGAATCTTCCACTTGTGTGA 1320 0.3909 MASIRRTLSPVPRAANVDVCSVSSPLTKSSPSPQKSIPSDGLLPSSFTSLDSSAFLLGFFFPRSLRNIEKSKPKGQLWRKVLFHFFICFMVGVSIGLIPLASTNLSLNLMSRNQGFSFEVISTVKKFQSLENVKINETPLVEEAVKFDATLISAVQEQELTDGVTYNISDSQFSDESYLESQKLLIIVTPTYNHLFQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSSGIMYRHLICKMNLTNTSHRSILMRNVAIAHIETHRLNGIVYFADNDNIYSVELFQQMREIRRFGTWTVARLSKDRRGILLQGPICNGSEVIGWHLNNESGGNSKRFHAEIQGFAFNSTILWDPKKRHRPSLKPIRQLESVKENLWASRLIEQIVEDESEMEGLMNDCSRVMVWNIDLESSYSFYPKKWITENNLDVIWNLPLV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07607 439 CDD GlcAT-I 183 414 IPR005027 GO:0015018|GO:0016020
Mepo3g07607 439 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 76 431 IPR005027 GO:0015018|GO:0016020
Mepo3g07607 439 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 184 431 IPR029044 -
Mepo3g07607 439 Pfam Glycosyltransferase family 43 204 414 IPR005027 GO:0015018|GO:0016020
Mepo3g07607 439 SUPERFAMILY Nucleotide-diphospho-sugar transferases 184 429 IPR029044 -
Mepo3g07607 439 Coils Coil 382 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07607 Mepo-Chr3 89359869 89362862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07607 1 433 Glycosyltransferase AT1G27600 41.109 4.82e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07607 K20869 - gmx:100808765 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07607 3 89359869 89362862 Mepo3g07607 3 89359869 89362862 ECH