Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07598 ATGCAGGCATCAAGGGCGAGGCTGTTCAAGGAGTACAAAGAAGTGCAACGAGAGAAGACAGCTGATCCTGATATTCAACTCGTTTGTGATGATTCCAACATTTTTAAATGGACAGCTTTAATCAAGGGACCTTCAGAGACTCCATATGATGGCGGTGTTTTCCAGCTTGCATTTTCTGTTCCAGAGCATTATCCTTTACAACCTCCTCAAGTTCGCTTTTTGACTAAAATATTTCACCCAAACGTGCATTTTAAGACCGGGGAGATTTGCCTTGATATCTTGAAAACTGCTTGGAGCCCCGCATGGACCCTGCAGTCTGTTTGTAGGGCTATAATTGCTTTGATGGCTCATCCAGAACCTGACAGCCCACTGAATTGTGATTCAGGTAATCTTCTACGTTCAGGTGATGTTAGAGGGTATCAGTCCATGGCAAGAATGTACACTAGGCTTGCAGCAATGCCAAAGAAAGGCTGA 474 0.443 MQASRARLFKEYKEVQREKTADPDIQLVCDDSNIFKWTALIKGPSETPYDGGVFQLAFSVPEHYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07598 157 CDD UBCc 7 148 IPR000608 -
Mepo3g07598 157 SUPERFAMILY UBC-like 4 153 IPR016135 -
Mepo3g07598 157 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 94 IPR023313 -
Mepo3g07598 157 Gene3D Ubiquitin Conjugating Enzyme 1 152 IPR016135 -
Mepo3g07598 157 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 134 - -
Mepo3g07598 157 Pfam Ubiquitin-conjugating enzyme 7 147 IPR000608 -
Mepo3g07598 157 FunFam protein PEROXIN-4 isoform X1 1 152 - -
Mepo3g07598 157 SMART ubc_7 6 153 - -
Mepo3g07598 157 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 3 153 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07598 Mepo-Chr3 89258251 89261863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07598 7 123 Miscellaneous Gene Families AT3G17000 34.959 6.46e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07598 K10689 - sind:105164758 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07598 3 89258251 89261863 Mepo3g07598 3 89258251 89261863 ECH