LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g07594	ATGGCGAACGACGAAGAACGTCTTCAAGCTCAAGACCTAGGTTACGATCCCAACTTCGTTCCCGATCCAGTCAAAACCTTCGTTGTTCACCTGTACCGTCACATCAGAGAGAAGAATGTATACGAGATCCACCAAATGTACGAAACCTCTTTCCAAACCCTATCTGAGCGTTTCTTCAAGGACACACCATGGCCCTCCGTAGACGCCGTCGCTCAATACGTCGACAACGACCATGTCTTCTGTCTTCTCTACCGTGAGATGTGGTTTCGCCACCTCTATGCTCGTCTCACTCCTACGCTTCGTCAGAGAATCGATTCGTGGGATAATTACTGTAGTCTCTTTCAGGTTGTTCTTCATGGTGTTGTCAATATGCAGCTTCCGAATCAATGGCTTTGGGATATGGTTGATGAGTTTGTTTATCAGTTTCAAAGCTTTTGTCAGTATCGTGCTAAAATGAAGAACAAAACTGAACAAGAAATTGCTCTCTTGAAACAGTTCGACCAGGCTTGGAATGTTTTTGGTGTTCTGAACTTCTTGCAAGCGCTAGTTGAGAAGTCAACGATTATTCAGATACTCGAGCAGGAGAAGGAAGGGCTTGAGCAATTCACTTCAAATGATGGCTATGATTACAATGGTGGTAGCAATGTCTTGAAAGTTTTGGGGTATTTCAGTATGGTTGGTTTGCTGAGGGTTCATTGTCTCTTGGGTGATTATCACACTGGTCTCAAGTGCTTGGAACCTATTGATATTAGTCAGTCAGGTGTTTACACCATTGTTATTGGATGCCACATTACCACCATTTACCACTATGGTTTTGCCAATCTTATGCTTCGCAGATACGTGGATGCAATTCGTGAATTCAACAAAATTCTCTTGTACATCTTTAAGTACAAGGTGTACCATCAGAAGTCGCCACAATATGAACAGATATTGAAGAAGAATGAACAAATGTATGCGTTGCTGGCGATTTCCCTCTCGCTCTGTCCCCAAAGCAGGCTTGTTGATGAAACTGTGAACTCTCAGTTGCGAGAGAAGTATGGCGAAAAGATGAGTAGAATGCAACGATATGATGATGAGGCTTTTGCTATGTATGACGAGCTCTTCTCATATGCATGCCCCAAGTTTATTACCCCTTCAGCGCCCAGTTTTGAAGAGCCTCTCGTAAATTACAACCAGGATGCGTATAGACTTCAATTGAAACTGTTCCTTTATGAAGCAAAGCAACAACAGTTGTTATCAGGTCTCCGGACCTTCTTGAAAGTATATTCAACAATCTCTCTTGCAAAACTTGCAAGTTACATGGAAGTAGATGAACCAACATTAAGGACTATCTTGATGACATACAAGCACAAGACTCATGCTGTTGATAGTGCTGGAAAAGTAATATCCAATGCTGATGTGGATTTCTATATTGATGATGACACAATTCATGTTGTGGAGTCTAAACCTTCCAAACGGTATGGAGATTACTTCTTGCGTCAGGTTGTTAAGCTGGAAAAGGTGATCAACGAGATGGACAGTATAAAGCTGGAGTGA	1536	0.4225	MANDEERLQAQDLGYDPNFVPDPVKTFVVHLYRHIREKNVYEIHQMYETSFQTLSERFFKDTPWPSVDAVAQYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLKQFDQAWNVFGVLNFLQALVEKSTIIQILEQEKEGLEQFTSNDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLEPIDISQSGVYTIVIGCHITTIYHYGFANLMLRRYVDAIREFNKILLYIFKYKVYHQKSPQYEQILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMSRMQRYDDEAFAMYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGLRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHAVDSAGKVISNADVDFYIDDDTIHVVESKPSKRYGDYFLRQVVKLEKVINEMDSIKLE	511

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g07594	511	Hamap	Eukaryotic translation initiation factor 3 subunit L [EIF3L].	9	500	IPR019382	GO:0003743\|GO:0005737\|GO:0005852
	Mepo3g07594	511	Pfam	RNA polymerase I-associated factor PAF67	102	497	IPR019382	GO:0003743\|GO:0005737\|GO:0005852
	Mepo3g07594	511	ProSiteProfiles	PCI domain profile.	283	485	IPR000717	-
	Mepo3g07594	511	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3	14	509	IPR019382	GO:0003743\|GO:0005737\|GO:0005852

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g07594	K15029		-	gmx:100804691	967.222

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g07594	3	89221646	89226154	Mepo3g07594	3	89221646	89226154	ECH