Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07592 ATGCGCCCACCGGTTATTCTCGAATCAACCACCACTTTTTCTTCTTCATCTGATCGCAGGCTAAACACTATTGCAAAACACTTTCTCGACGTTAACGATCAAAATCAAATGGCTTCTCAAAACATCACTCCTTCTCCAACCGCTTCTTCTGATTCCGTCTTCGCTCATCTCGTTCGTGCTCCTGAAGACCCTATCCTCGGTGTAACTGTCGCTTACAACAAGGATCCAAGCCCAGTTAAGCTCAACTTGGGTGTTGGTGCTTACCGAACTGAGGAAGGTAAACCCCTTGTGTTGGATGTTGTGAGGCGAGTTGAACGCCAACTATTGAATGATATGTCACGCAACAAGGAGTATATTCCAATTGTTGGGCTCGCTGATTTTAACAAATTGAGTGCTAAGCTTATTTTTGGTGCAGACAGCCCTGCTATTCAAGAGAACAGGGTTACCACTGTTCAAGGGTTATCTGGTACTGGTTCGCTAAGAGTTGGGGGTGAATTTTTGGCCAAACACTATCATCAACGCATTATATACTTGCCAACACCTACTTGGGGAAATCATACAAAGATTTTCAACTTGGCAGGTTTAACTGTCAAAACATATCGCTACTATGCTCCAGCAACACGAGGGCTTGATTTTCAAGGACTTCTTGAGGATCTTGGTTCTGCCCCATCTGGATCTGTTGTTTTGCTACATGCATGCGCACATAACCCTACTGGTGTTGATCCAACGCTTGAACAATGGGAGCAGATTAGACAGCTAATAAGATCAAAATCCTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCCAGTGGAAGTCTAGATGCAGATGCACAGCCTGTTCGTTTGTTTGTTGCTGATGGTGGAGAATTGCTGGTAGCCCAGAGTTATGCGAAGAACATGGGTCTTTATGGTGAACGTGTTGGTGCCTTGAGCATTGTCAGCAAGTCAGCTGATGTGTCAGGCAGGGTTGAGAGCCAACTGAAACTTGTGATTAGGCCCATGTACTCAAGTCCTCCTATTCATGGTGCATCCATTGTGGCTGCCATTCTCAAGGACAGGGATTTGTACAATGACTGGACTATTGAGTTGAAGGCAATGGCTGATCGCATTATCAATATGCGCCAACAACTTTTTGATGCTTTACGTGCTAGAGGTACACCAGGTGATTGGAGTCACATTATCAAGCAAATTGGAATGTTTACTTTCACAGGATTGAATCCTGAGCAAGTTTCCATCTTGACTAAAGAGTATCATATATACCTGACATCTGACGGGAGGATTAGCATGGCTGGTTTGAGCTCCAAAACAGTCCCACATCTGGCTGATGCAATACATGCAGTTGTAACCCGAGTTGCTTAA 1365 0.444 MRPPVILESTTTFSSSSDRRLNTIAKHFLDVNDQNQMASQNITPSPTASSDSVFAHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKIFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLHACAHNPTGVDPTLEQWEQIRQLIRSKSLLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNMGLYGERVGALSIVSKSADVSGRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLYNDWTIELKAMADRIINMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLADAIHAVVTRVA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07592 454 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 297 310 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mepo3g07592 454 PANTHER ASPARTATE AMINOTRANSFERASE 48 452 IPR000796 GO:0006520|GO:0008483
Mepo3g07592 454 PRINTS Aspartate aminotransferase signature 259 271 IPR000796 GO:0006520|GO:0008483
Mepo3g07592 454 PRINTS Aspartate aminotransferase signature 395 413 IPR000796 GO:0006520|GO:0008483
Mepo3g07592 454 PRINTS Aspartate aminotransferase signature 228 247 IPR000796 GO:0006520|GO:0008483
Mepo3g07592 454 PRINTS Aspartate aminotransferase signature 327 352 IPR000796 GO:0006520|GO:0008483
Mepo3g07592 454 FunFam Aspartate aminotransferase 113 354 - -
Mepo3g07592 454 CDD AAT_like 81 434 - -
Mepo3g07592 454 Gene3D - 113 354 IPR015421 GO:0003824
Mepo3g07592 454 SUPERFAMILY PLP-dependent transferases 52 452 IPR015424 -
Mepo3g07592 454 Pfam Aminotransferase class I and II 80 446 IPR004839 GO:0009058|GO:0030170
Mepo3g07592 454 Gene3D Aspartate Aminotransferase, domain 1 59 446 IPR015422 GO:0003824
Mepo3g07592 454 FunFam Aspartate aminotransferase 343 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07592 Mepo-Chr3 89215263 89219964 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07592 K14454 - gmx:547509 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07592 3 89215263 89219964 Mepo3g07592 3 89215263 89219964 ECH