LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g07572	ATGGCTCCTGCACCACCGCAATCTAATCGATCTCCTTCGCCGTCGCAACCGTCCGGGAAGAGTGAAGTATCTGATCTAAAATTACAGCTACGGCAGCTTGCTGGGAGTCGAGCTCCGGGTACTGACGACTCTAAGAGGGACCTTTACAAGAAGGTGATATCAAACATGACTATAGGTATTGATGTTTCGTCTCTCTTTGGTGAGATGGTAATGTGTTCAGCAACATCAGACATTGTTTTGAAGAAAATGTGTTACCTGTATGTTGGAAACTATGCTAAGGTTAATCCGGATCTTGCTCTTTTGACGATTAATTTTCTACAAAGGGATTGTAAGGATCAGGATCCAATGATTCGGGGACTGGCATTGAGGAGTTTGTGTTCACTTCGAGTGGCGAATTTGGTGGAGTATTTGGTTGGGCCTTTAGGGTCAGGGTTGAAGGATAATAATAGTTATGTCAGGACGGTGGCAGTAATTGGTGTTTTGAAACTGTATCATATATCAGCCTCCACGTGTATTGATGCAGATTTTCCAGAAACGTTGAAGCATTTGATGCTCAATGACCAGGATACTCAGGTAGTTGCAAATTGTCTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCAACCACCTCAGAGGAAGCAGCTAGGGAGAGAGAAACTCTGCATAGCAAGCCAATTGTTTATTACCTTCTGAATCGCATTAAGGAATTTAGTGAATGGGCACAATGTCTTGTGATGGAATTGGTGGCCAAGTACATTCCATCAGATAACAGTGAAATATTTGATATAATGAATCTCCTTGAAGATAGACTACAGCATGCAAATGGTGCTGTTGTCTTGGCAACTACAAAAGTATTTCTGCACTTGACTTTATCTATGGCTGATGTACATCAGCAGGTATATGAGCGTATCAAAGCCCCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCGGAACAGTCTTATGCAATTCTAAGCCACCTGCATCTCTTGGTAATGCGTGCACCATATATATTTTCCTCGGACTACAAACACTTCTATTGCCAGTATAACGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAACACCTATGAGATAGTGACAGAATTATGTGAATATGCTGCAAATGTTGACATCCCAATTGCAAGGGAATCAATTCGGGCTGTTGGAAAGATAGCATTACAGCAGTATGATGTCAATGCTATTGTTGATCGGCTTCTGCAGTTTCTGGAGATGGAAAAGGACTATGTTACATCTGAAGCTCTGGTGCTTGTGAAAGATCTTCTAAGAAAATATCCTCAATGGAGTCAAGATTGTATTGCTGTTGTAGGGAATATCAGTAGCAACAATGTCCAAGAACCTAAGGCTAAGGCAGCTCTCATATGGATGCTGGGGGAATATTCTCAAGACATGCATGATGCTCCGTATGTCTTGGAAAGTCTGGTTGAAAATTGGGACGAGGAGCATTCTGCTGAGGTTCGCTTGCATCTTCTTACTGCAGTGATGAAGTGTTTCTTTAAGAGACCTCCTGAGACTCAGAAAGCACTGGGAGCTGCACTGGCCGTTGGTCTTGCTGATTTTCACCAGGATGTTCATGATAGGGCCTTATTTTATTACAGGCTTCTACAACACAATGTATCGGTGGCTGAGAGTGTGGTGAACCCTCCAAAACAAGCAGTTTCAGTATTTGCCGATACTCAGAGCAGTGAAGTTAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTTGTATACCAAAAGCCTTCTTACATGTTCACGGATAAGGAACACCGAGGGACATTTGAGTTTTCAGATGAACTTGGAAATCTATCTATTAGTGCAGAATCCGGAGATTCTGTTGTTCCTGCGCAGAGAGTGGAGGCAAATGACAAGGATCTGCTTCTAAGTACCACGGAAAAAGATGATGTGAGAGATACTGGAAGCAATGGTTCTGCTTATAATGCTCCTTCCTATAATGGGTCTGCCCCTTCAGCAGCTTCACAACCGCTTGCAGATTTGGCATTTTCAAGTACCAGCACGACTAGCCAAGCATTGGCAATTGATGATCTGCTTGGTTTAGATTTTTCAGTTGGGACTGTAAGCACACCATCACCTCCCTTATTGACCCTCAACCCAAAAGCTGTACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAACTACCAATATCCTTATCAGAGGAATATTCTTTAAGCCCTCTTGCAATTGCATCATTGACGACTCCCAATGCACTCCTACGGCACATGCAAAGTCAGTCAATACAGTGCATTGCATCCGGCGGCCAGTCTCCTAATTTCAAGTTCTTTTTCTTTGCTCAAAAAGCGGAAGAAACATCAATATATCTTGTAGAGTGTATAATCAACACATCATCTGCTAAGTCACAGATTAAAATAAAGGCTGATGACCAAAGCTCATCACAGGCATTCTCAACATTATTCCAATCAGCTTTGTCCAAATTTGGTTTGCCCTGA	2523	0.4233	MAPAPPQSNRSPSPSQPSGKSEVSDLKLQLRQLAGSRAPGTDDSKRDLYKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVLKLYHISASTCIDADFPETLKHLMLNDQDTQVVANCLSALQEIWTLESTTSEEAARERETLHSKPIVYYLLNRIKEFSEWAQCLVMELVAKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSNNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAVGLADFHQDVHDRALFYYRLLQHNVSVAESVVNPPKQAVSVFADTQSSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFSDELGNLSISAESGDSVVPAQRVEANDKDLLLSTTEKDDVRDTGSNGSAYNAPSYNGSAPSAASQPLADLAFSSTSTTSQALAIDDLLGLDFSVGTVSTPSPPLLTLNPKAVLDPGTFQQKWRQLPISLSEEYSLSPLAIASLTTPNALLRHMQSQSIQCIASGGQSPNFKFFFFAQKAEETSIYLVECIINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGLP	840

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g07572	840	Gene3D	-	709	838	IPR012295	-
	Mepo3g07572	840	PIRSF	Beta_adaptin	11	840	IPR016342	GO:0015031\|GO:0030276
	Mepo3g07572	840	Pfam	Beta2-adaptin appendage, C-terminal sub-domain	721	834	IPR015151	GO:0006886\|GO:0016192\|GO:0030131
	Mepo3g07572	840	SMART	B2_adapt_app_C_2	718	835	IPR015151	GO:0006886\|GO:0016192\|GO:0030131
	Mepo3g07572	840	MobiDBLite	consensus disorder prediction	1	24	-	-
	Mepo3g07572	840	PANTHER	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	16	805	IPR026739	GO:0016192
	Mepo3g07572	840	FunFam	Beta-adaptin-like protein A	14	609	-	-
	Mepo3g07572	840	MobiDBLite	consensus disorder prediction	648	673	-	-
	Mepo3g07572	840	MobiDBLite	consensus disorder prediction	657	673	-	-
	Mepo3g07572	840	Gene3D	-	15	610	IPR011989	-
	Mepo3g07572	840	FunFam	Beta-adaptin-like protein	709	838	-	-
	Mepo3g07572	840	Pfam	Adaptin N terminal region	40	553	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Mepo3g07572	840	SUPERFAMILY	ARM repeat	29	599	IPR016024	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g07572	Mepo-Chr3	89061949	89071588	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g07572	-		-	gmx:100801153	1491.09

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g07572	3	89061949	89071588	Mepo3g07572	3	89061949	89071588	ECH