Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07556 ATGGGTATAACAGAAGCATTTTCCAAATTTGTAGTTGAATTTTTACAGGCATTCAAAAACTCACCAAGAAACTCAATGCCTCATCATGATCACCTTGATCAAAATCATCAACAGAACATACTCAAGCTCGACGAAAGGATGATTCGAGCTCTTGTTACTGTCTTCGGAATGGAAACAAATGGAAGAATCAAGAAGGAAAATGCTAGGCAAGTGGTGGAGAAGCTTGGTTTGATCTATGGTTCTGATCAAAAGGAGAACAAAGTCTTCCAAGATGACGATGAAGAAGAAGTGGTTGTTGAAGAGGTGCTTGGTGAATTGGAAGATATGTCAAAGAGAAGTGAGTTATTGCTTGAAGCTTTCAAAATATTTGATGAGGATGATGATGGATATATAGATGCAATGGAGTTGAAGAGAGTGCTTGATTGCTTGGGTTTGGATAAAGGTTGGGATATGAATACAATTGAAAGGATGGTTAAGGTTGTTGATTTGAACTTTGATGGAAAAGTTGATTTTAGTGAGTTTGAATTGATGATGGGATAG 540 0.3704 MGITEAFSKFVVEFLQAFKNSPRNSMPHHDHLDQNHQQNILKLDERMIRALVTVFGMETNGRIKKENARQVVEKLGLIYGSDQKENKVFQDDDEEEVVVEEVLGELEDMSKRSELLLEAFKIFDEDDDGYIDAMELKRVLDCLGLDKGWDMNTIERMVKVVDLNFDGKVDFSEFELMMG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07556 179 CDD EFh 116 174 IPR002048 GO:0005509
Mepo3g07556 179 ProSitePatterns EF-hand calcium-binding domain. 124 136 IPR018247 -
Mepo3g07556 179 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 55 178 - -
Mepo3g07556 179 Pfam EF-hand domain pair 116 178 IPR002048 GO:0005509
Mepo3g07556 179 ProSiteProfiles EF-hand calcium-binding domain profile. 111 146 IPR002048 GO:0005509
Mepo3g07556 179 SMART efh_1 153 179 IPR002048 GO:0005509
Mepo3g07556 179 SMART efh_1 115 143 IPR002048 GO:0005509
Mepo3g07556 179 Gene3D - 44 107 - -
Mepo3g07556 179 SUPERFAMILY EF-hand 45 178 IPR011992 -
Mepo3g07556 179 ProSiteProfiles EF-hand calcium-binding domain profile. 149 179 IPR002048 GO:0005509
Mepo3g07556 179 Gene3D - 42 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07556 Mepo-Chr3 88897043 88897774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07556 65 174 EF-hand Containing Proteins AT3G29000 38.182 1.93e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07556 - - adu:107470962 237.654