Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07515 ATGGCCATTTCCCTTTACAACACTACACTTCCATTTCTTTCTCTAACATCATTCCTCACAATCACAAACCCAACAACACGGTTTCAATTCCCAACCATCGCAATGAACTTGTGCACCAAATCCCAACCCGTAACCACCTCATCAGCATCTTCTTCGTCAATGCAGCACGTGCCAGAGCTAGACTTTAACGAAATGGAACGTGTGACAAACCAAACATTCCAAAGGTACACTTCCAATAGCACCAAGAGGAGTGGTAAAGGTACAGCAATAGTGTGGTTTAGAAACGATCTCAGAGTTTTGGATAATGAAACTCTCTACAAGGCTTGGCTTTCTTCTCAAACTCTCTTGCCTGTTTACTGTATTGATCCTCGACTATTTGCAACCACTTACCATTTCGGATTTCCAAAAACTGGAGCGTTGAGAGCACAGTTTCTCCTTGAATGTTTGGCTGACTTGAGGAAGAATCTAATGAAACGGGGACTTAATTTGCTTATTCAACATGGCAAACCTGAAGATATTCTTCCTTCTCTAGCTAAAGCTTTTGGAGCTCATGCTGTTTATGCACAGAAAGAAACTTGTAGTGAAGAGCTGGATGTTGAAAGGTCTGTCAACAAATGTCTTCAACAAGTGGTGGTACCATCTGATGGATCCTCTGGGGCGGCATCATCTTCTAACAGCCACCCCAAATTACAGTTTGTTTGGGGCACCACTATGTACCACCGTGATGATCTTCCTTTTGATGTCACTTGTTTGCCAGATGTTTATACTCAATTTCGTAAGACTGTTGAAGCGAAATGTGCCGTGCGCTCATGCATCAAACTGCCAACATCACTTGGACCACCTCCACCAATTGAGGATTGGGGATGCCTTCCTTCATTGGAGCAGCTGGGATTTTGCTCACACAACGTTAACAAGGGGATGAAATTTTTGGGAGGTGAAACTGCCGCATTGAGCAGAATATATGAATACTTTTGGAAGAAGGATTTACTAAAGGTATATAAAGAGACCCGGAATGGGATGTTAGGGCCTGATTATTCTACTAAGTTCTCACCATGGCTTGCATCCGGAAGCTTGTCTCCTCGTCTCATACACGAAGAGGTGAAGAGATATGAGAATGAAAGACAAGCAAATAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTTAGGTTTTTATCAGTCAAATATGGAAATTCACTTTTCCATATAGGTGGACCAAGAAATGTTCAGAAAAGTTGGAGCCAAGACAAGAAATTATTTGAATCCTGGAGAGATGGTTGTACAGGGTATCCTCTGATAGATGCAAATATGAAAGAATTATCAACTACAGGTTTTATGTCAAACCGAGGACGGCAGATTGTGTGTTCCTTCCTAGTTCGAGACATGGGCATAGATTGGCGCATGGGAGCAGAATGGTTTGAGACATGTCTTTTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTATGGATCAGGAGTCGGGAATGATCCCAGAGAAGACCGATATTTCAGCATACCAAAACAAGCACAAACATATGACCCAGAAGGTGAATATGTTGCATACTGGTTGCCACAGTTAACAGCAATCTCAAAAGAAAAAAGGAACTTTCCTGGTAATTTATACATTCGTCAAATTGTGCCTCTCAAGTTTGGAACGACTAGTAGACATAATAACGGGGACAAGTCACTTGGTGCAAGAAGAGGTGATGATAGACGAAATGAACGAAGATGGAACAAGAGATAA 1761 0.4174 MAISLYNTTLPFLSLTSFLTITNPTTRFQFPTIAMNLCTKSQPVTTSSASSSSMQHVPELDFNEMERVTNQTFQRYTSNSTKRSGKGTAIVWFRNDLRVLDNETLYKAWLSSQTLLPVYCIDPRLFATTYHFGFPKTGALRAQFLLECLADLRKNLMKRGLNLLIQHGKPEDILPSLAKAFGAHAVYAQKETCSEELDVERSVNKCLQQVVVPSDGSSGAASSSNSHPKLQFVWGTTMYHRDDLPFDVTCLPDVYTQFRKTVEAKCAVRSCIKLPTSLGPPPPIEDWGCLPSLEQLGFCSHNVNKGMKFLGGETAALSRIYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRLIHEEVKRYENERQANSSTYWVLFELIWRDYFRFLSVKYGNSLFHIGGPRNVQKSWSQDKKLFESWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLTAISKEKRNFPGNLYIRQIVPLKFGTTSRHNNGDKSLGARRGDDRRNERRWNKR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07515 586 MobiDBLite consensus disorder prediction 566 586 - -
Mepo3g07515 586 Gene3D HUPs 51 235 IPR014729 -
Mepo3g07515 586 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 406 560 - -
Mepo3g07515 586 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 307 543 IPR036134 -
Mepo3g07515 586 PRINTS DNA photolyase signature 491 505 IPR002081 -
Mepo3g07515 586 PRINTS DNA photolyase signature 432 448 IPR002081 -
Mepo3g07515 586 PRINTS DNA photolyase signature 452 470 IPR002081 -
Mepo3g07515 586 MobiDBLite consensus disorder prediction 559 586 - -
Mepo3g07515 586 Pfam FAD binding domain of DNA photolyase 385 539 IPR005101 -
Mepo3g07515 586 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 87 220 IPR006050 -
Mepo3g07515 586 NCBIfam DASH family cryptochrome 88 531 IPR014133 GO:0003913|GO:0006281
Mepo3g07515 586 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 86 285 IPR036155 -
Mepo3g07515 586 Gene3D - 236 405 - -
Mepo3g07515 586 PANTHER CRYPTOCHROME 87 551 IPR002081 -
Mepo3g07515 586 Pfam DNA photolyase 89 270 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07515 Mepo-Chr3 88507786 88513175 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07515 K25656 - gmx:100783312 945.651