Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07446 ATGGAAGCCTCTTCCGGCATGGTTGCCGGGTCCCACAATCGTAACGAGCTTGTTCGGATTCGTCACGATTCTGCCGACAGCGGGCCGAAACCATTGAAGAATTTGAATGGACAAGTCTGTCATATATGTGGTGAGGATGTTGGATCAACACCCACCGGTGATGTGTTTGTTGCTTGTAATGAATGTGGTTACCCTGTTTGTCGAGATTGTTATGAATATGAGCGAAAAGAAGGCAATAAATCTTGTCCTCAATGCAAAACTAGATACAAAAGGCTCAGAGGGAGTCCTAGAGTCGATGGAGATGATGAAGAAGATGATGTTGATGATATTGAGAACGAGTTCAATTATCGACAAGGAAATAATAATAATAACAAGTCAAGGAGACAGTGGGAAGATGAAGACAGATCAGCTTCATCTTCTAGACGCGAATATCAGCAACCTCCTCTTCTCACCAATGGCCAAACTATGTCTGGCGAGATCCCTACACCTGATAATCAATCTGTCCGAACTACTTCTGGTCCTTTGGGCCCATCTGAGAAAGCTCACTCACTTCCCTATATCGATCCAAGGCAACCAGTCCCGGTGAGAATTGTGGATCCATCAAAGGACTTAAACTCATATGGTTTGGGAAACGTTGACTGGAAGGAAAGGGTTGAAGGTTGGAAGCTGAAGCACGAGAAAAATATGGTACAGATGACCGGTAGATATGCTGATGGGAAAAGCGGAGGAGGAGATATTGAAGGGACTGGTTCTAATGGAGAAGAACTTCAAATGGTTGATGATGCTCGACAACCTATGAGTCGGATTGTACCTATTTCTTCATCTCAGCTGACCCCTTATCGTGTTGTCATCGTGTTCCGGCTGATAGTTCTTGGTTTCTTCTTGCAATATCGTGTAACTCACCCGGTAAAAGATGCTTACCCACTGTGGTTGACTTCAGTTATCTGTGAGATTTGGTTTGCGTTTTCCTGGATTTTGGATCAGTTTCCAAAATGGTCTCCCATTAATCGTGAGACTTATCTGGAGAGGCTTGCCATAAGATATGATCGTGATGGAGAACCATCACAGCTGGCTCCTGTCGACGTATTTGTCAGTACAGTGGACCCTCTCAAAGAGCCACCTATTGTAACTGCAAACACTGTTTTATCTATACTCGCTGTTGACTACCCTGTCGACAAGGTTTCTTGCTATGTATCTGATGATGGTTCAGCTATGTTGAGTTTTGAAGCCTTATCTGAAACCGCCGAGTTTGCAAAGATGTGGGTGCCCTTTTGCAAAAAACACAGTATTGAGCCAAGAGCACCTGAATTTTATTTTCTTCAGAAGATTGATTACTTAAAGGACAAGGTTCAACCCTCTTTTGTTAAGGAGCGACGAGCAATGAAGAGACAATATGAAGAATTCAAAGTAAGGATCAATGCCTATGTCGCCAAAGCTCAGAAGATGCCAGAGGAAGGTTGGACAATGCAGGATGGAACTCCTTGGCCAGGAAATAATCCCAGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGGCTTGATACAGATGGTAATGAACTTCCCAGGCTTGTTTATGTGTCTCGTGAAAAGCGACCAGGCTTCCAACATCACAAGAAGGCTGGAGCTATGAATGCTTTGATTCGAGTTTCTGCTGTCTTGACCAACGGTGCATATCTTTTGAATGTCGATTGTGATCATTATTTCAATAATAGCAAAGCTCTTAAGGAGGCTATGTGTTTCATGATGGATCCTGCTTATGGAAAGAAGACATGCTATGTTCAATTTCCGCAGAGATTTGATGGCATTGACTTGCACGATCGATATGCCAATCGCAATATTGTCTTCTTCGATATCAATTTGAAAGGTCAGGATGGTATTCAGGGCCCTGTCTATGTGGGAACTGGTTGCTGTTTCAATAGGCAAGCTTTGTATGGTTATGATCCTGTTTTGACTGAGGAAGATCTCGAACCTAACATTATTGTTAAGAGTTGTTGGGGTTCTAGAAAGAAAGGAAAGGGTGGGAATAAGAAGTACGGTGACAAGAAGAGGGGAGTTAAAAGAACTGAATCCACCATTCCCATATTTAATATGGAGGATATAGAGGAGGGTGTCGAAGGTTATGATGATGAAAGGTCACTTCTAATGTCTCAGAAGAGCTTGGAGAAGCGTTTCGGACAGTCTCCGGTTTTTATTGCTGCCACGTTCATGGAGCAAGGTGGCCTTCCACCTTCAACCAATTCTACAACTCTTCTTAAGGAAGCAATCCACGTTATCAGCTGTGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATCTTGACTGGGTTTAAGATGCATGCACGTGGTTGGATTTCTGTCTATTGCATGCCACCTCGTCCAGCATTTAAGGGTTCTGCTCCCATCAATCTTTCTGACCGTCTCAATCAGGTGCTTCGGTGGGCCTTGGGTTCAATAGAGATCTTCCTTAGCAGGCATTGTCCTTTATGGTATGGCTACAATGGAAGGATGAGGCCTCTCATGAGGCTGGCTTATATCAACACAATTATTTACCCCTTTACCTCAATCCCATTGCTTGCGTACTGTGTGCTTCCTGCATTTTGTCTTCTCACAAACAAATTTATTATTCCTGAGATAAGTAACTTTGCAAGCATGTGGTTTATTCTCCTCTTTACCTCCATTTTCACTACTTCAATTCTGGAGCTTAGGTGGAGTGGTGTTGGTATAGAAGACTGGTGGAGAAACGAGCAGTTTTGGGTTATCGGTGGAACATCTGCACATCTTTTCGCTGTGTTCCAAGGGCTTCTCAAAGTGCTTGCAGGGATTGACACAAATTTTACCGTTACATCAAAGGCAAATGACGAAGATGGGGACTTTGCCGAGCTATACGTGTTCAAATGGACATCACTTCTTATCCCTCCTACAACAGTACTTATTGTGAATTTGATAGGTATTGTGGCTGGTGTGTCTTTTGCCATAAACAGTGGTTACCAATCTTGGGGTCCATTATTTGGAAAGCTCTTCTTTGCTATATGGGTCATTGCTCATTTATACCCTTTCTTGAAGGGTCTTTTGGGGAAATCAAATCGGACACCAACCATTGTTATTGTCTGGGCCGTTCTCCTTGCTTCTATATTCTCGTTGTTGTGGGTGAGGATTGACCCCTTCATCTCTGATCCCAACAAATCATCATCCAATAGTCAATGTGGTATCAACTGCTAG 3264 0.4326 MEASSGMVAGSHNRNELVRIRHDSADSGPKPLKNLNGQVCHICGEDVGSTPTGDVFVACNECGYPVCRDCYEYERKEGNKSCPQCKTRYKRLRGSPRVDGDDEEDDVDDIENEFNYRQGNNNNNKSRRQWEDEDRSASSSRREYQQPPLLTNGQTMSGEIPTPDNQSVRTTSGPLGPSEKAHSLPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKHEKNMVQMTGRYADGKSGGGDIEGTGSNGEELQMVDDARQPMSRIVPISSSQLTPYRVVIVFRLIVLGFFLQYRVTHPVKDAYPLWLTSVICEIWFAFSWILDQFPKWSPINRETYLERLAIRYDRDGEPSQLAPVDVFVSTVDPLKEPPIVTANTVLSILAVDYPVDKVSCYVSDDGSAMLSFEALSETAEFAKMWVPFCKKHSIEPRAPEFYFLQKIDYLKDKVQPSFVKERRAMKRQYEEFKVRINAYVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGQDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGKGGNKKYGDKKRGVKRTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGLPPSTNSTTLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRMRPLMRLAYINTIIYPFTSIPLLAYCVLPAFCLLTNKFIIPEISNFASMWFILLFTSIFTTSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDEDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGKSNRTPTIVIVWAVLLASIFSLLWVRIDPFISDPNKSSSNSQCGINC 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07446 1087 MobiDBLite consensus disorder prediction 126 140 - -
Mepo3g07446 1087 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 113 IPR013083 -
Mepo3g07446 1087 FunFam Cellulose synthase 477 651 - -
Mepo3g07446 1087 FunFam Cellulose synthase 22 113 - -
Mepo3g07446 1087 MobiDBLite consensus disorder prediction 141 177 - -
Mepo3g07446 1087 Pfam Cellulose synthase 360 1078 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mepo3g07446 1087 Pfam Zinc-binding RING-finger 30 107 IPR027934 -
Mepo3g07446 1087 ProSiteProfiles Zinc finger RING-type profile. 40 86 IPR001841 -
Mepo3g07446 1087 CDD mRING-HC-C4C4_CesA 38 88 - -
Mepo3g07446 1087 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 518 660 IPR029044 -
Mepo3g07446 1087 MobiDBLite consensus disorder prediction 113 199 - -
Mepo3g07446 1087 SUPERFAMILY Nucleotide-diphospho-sugar transferases 378 660 IPR029044 -
Mepo3g07446 1087 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 264 1053 - -
Mepo3g07446 1087 SMART ring_2 40 85 IPR001841 -
Mepo3g07446 1087 SUPERFAMILY RING/U-box 25 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07446 Mepo-Chr3 87835228 87841771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07446 1 1085 Glycosyltransferase AT4G32410 84.361 0.0 1870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07446 K10999 - gmx:100810567 2038.85