Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07438 ATGGATTTTGATGGAAGTGTAAAAGATTCAGTGCTTACTACTACTCAAGTCAGCATCGGTGGATTTGACTCTGATGTCAAAGCTTCTGATTTGGTGTCATACTTGGAATCCAAGATCGGATATGTTGATAGATGTCGTCTGAAGACTTCTTGTACTCCTCCGGAGTCATATCCAGAATTTACTATGACTGATACTAAACAGATAGAAATTACAGATGACTATAAGAAGGTGGCGCCTCATGCCTTTGTGCATTTTACTTTGCCGGATTCTGCAACTGAGGCCCTCAATGCTGCAGGTCGCTGTGACCTAATTTTGAATGGTAAGGTGTTAAAGGTCATCAGTGGGCCACAAAATCCAAACTTCCTGAACCAAAGGAGGCGAACTGAAGCTCCTTTTAAGATGTCGGATGTAATCGTTGAAATTGGGACTTTGGTTAGCCTAGCGGATTTTACTGTTGCTTGGAGAGGGTGCGATAAAGGGGTAAACTTTCTTGTGGACCCTTTTGACAAAATGTGCAAGATTTGTTTCAATAGGGATACTGTGTTCTCATTCAAAGGAATAGGTAAACAAGCAGTGATAAAATGTGATTTTAAGATGGGGTTCTTGATTAGAGACATCGAGGAGATCCAAAGATATGATGATACATCGCATCTTGTTGTTTTATTACGTCTAGCTTCATCACCGTTGGTTTGGTACAGAACTGCCGATGACGACATTGATGAATCGGTCACAATTGATTTGTTAGACGACGACGATCCTTGGATCAGGACCACAGACTTTACCCCCAGTGCAGCCATTGGACGATGCAATTATTATAGAATATCAATCCCACCTCGTCATGGTGCCAAACTGAACAAGGCCTTGGAATATTTGAGACGCCAAAGAGTGCCACGGATTCCGCTTAACCGGCCACCTAAGATACAAAATGAACCTGATTTTGGGGTTCCCATGTCAGATGCTTTCTTCTACATAGATTCTCAGAAGGACATTTCTTTTGATATAATGTTCTTGATTAATGCAATTGTACACAGAGGAATATTCAATCAGTATAGTTTATCAAACAAGTTTTTTGAATTGCTGAAAAACCAACCTAAGGATGTCAATGTGGCTGCTCTGAAGCACATATGTACTTTCAAGCACCCACTGTTTGATGCAGCTAAGAGACTAGAAGCAGTCCAAAAATGGTTGCTCAAAAATCCTAAGATTTATCAGATCTCCAAGCAGTTTGATGGTGTTATGGAGGTTAGAAGGCTAGTTGTTACTCCAACAAAAGCCTATTGTATATCACCAGAAGTTGAATTGTCCAATAGAGTCCTCAGAAGATTTAGAGAAGTTTCAGACCGATTCTTGAGAGTCACCTTTATGGATGAAGGACAGCAAACACTTAATAATTATGCTCTTAACTATTATGTTGCTCCCATTGTGAAGGAAATCACATCAAACTCCTTCCCACAGAAGACGAGAATATATAAAAGGGTGAAGACAATCCTGGAAGACGGGTTTTACTTTTGTGGCCGAAAATATTCATTTTTAGCATTTTCATCCAATCAACTTAGAGATCGTTCTGCTTGGTTTTTTGCTGAGGACAAGGACATAACTTGTGATGATATAAGAAATTGGATGGGTAGGTTTAACCAGAAGAATGTTGCAAAGTGTGCAGCTAGGATGGGGCAATGCTTCTCATCCACATATGCATCAGTAGAAGTTCCTGCGAATGAAGTTAACTCAATGCTCCCTGATGTGGAGAGGAATAATTATGTTTTCTCTGATGGCATTGGTATTATCACTACGGATCTTGCAGTTGAAGTTGCTGAAAAATTGAAATTGGACAAGGCACCCTCTGCTTACCAGATCAGGTATGCTGGTTTTAAAGGGGTTGTAGCCTGTTGGCCTGCTAAAGGGGATGGAATCAAGCTTTCTTTGAGACCCAGCATGAACAAGTTTCAATCCACTCATACTACCTTGGAGATCTGTGCCTGGACTAGGTTTCAACCTGGTTTTCTTAACAGGCAGATTATAACATTGCTTTCAGCTCTGGATGTGCCTGATGAAATATTCTGGAAAATGCAGGAGGGAATGCTTTCAAGTTTAAATCAAATGCTGGTTGATCGAGACGTGGCCTATGATGTTCTAACCAAGTCTTGTGCCGAGCATGGAAATGCTGCAGCAATAATGTTAAGTTGTGGCTTCAGTCCCAAAACAGAACCTCATCTTAGAGGCATGCTAAACTCTATACGTGCTGCACAGCTTTGGGGCCTTAGAGAAAAGTCTAGGATTTTTGTTTCATCAGGCAGATGGTTGATGGGCGTCTTAGATGAGTTGGGTGTGCTTGAACAAGGGCAATGCTTTGTTCAAGTGTCTACTCCTTCTCTTGAAAATTGTTTCTCCAAGCATGGCTCAAGATTTTCTGAGACAAAAACCGTGCATGTGGTCAAAGGTACTGTGGTTATAGCCAAAAATCCATGTCTTCACCCTGGAGATGTGAGAGTTTTGGAGGCAGTTGATGTCCCGGATTTGCATCATTTATATGACTGTCTTGTTTTCCCTCAAAAGGGTGATAGACCCCATACAGATGAAGCTTCTGGAAGTGACCTTGACGGGGATCTATATTTTGTCACTTGGGATGGAAATCTCATTCCACCAAGTAAGAGGAGCTGGCCCCCTATGGAGTACGCTGCTCAAGAAAGCCGGCTTCAAACACGGCAAGTCACTGTCCAGGACATCATAGATTTTTTTGTCAGAAACATGGTGAATGAGCAGTTGGGTTCAATTTGCAATGCACATGTGGTACATGCTGATTCCAGTGACTACGGTGCCTTGGATGAGAATTGCGTACACTTAGCTGAGTTAGCAGCTACTGCAGTTGATTTTCCGAAGACCGGTAAGCTTGTCACCATGCCCCCAAATCTGAAACCGAAACTGTACCCTGATTTTATGGGGAAAGAGCACCACCAATCATACAAGTCCAAAAAAATCCTGGGGAGACTTTATCGGCGGATTAAAGATGCGTATGATAAAGATATTGATGCTCCTGAATTCAACTGTGTGTCCAGTGATATACTTTATGATACAGATCTTGAGGTTCCAGGATCTTCTGAATTCATTGCTGATGCATGGGAGCAAAAGTGCTCTTATGATGGCCAGTTAAGTGGATTACTGGGTCAGTACAAAGTGAAAACAGAAGAAGAAGTTGTCACTGGACAGATCTGGTCCATGCCAAAATACAACAGCAGGAAGCAAGGGGAACTTAAGGAGAGGCTGAAGCACTCCTACAGTGCACTGAAAAAAGAATTTAGGCAAATTTTTGAGAAACTGAAGTCAGATGTTGGAGAATTAAGCGATAAAGAAAAAAATTTGTTGTATGAACAAAAAGCTTCGGCCTGGTATCAAGTGACATATCATCCTAAATGGGTGAAGAAATCCCTTGATTTGCAGCTTAAATCCTCAGATAATCAGAGTGCAGATAGTTTGGGGAATATGGTGATGTTGAGTTTTCCATGGATTGCAGTTGATTACCTTGCTTGCACAAAGACAAGGCATCGGAGAGTTAAAGATTTTGACTCAACCAAGCAAGTTGATTCTCTAGCGAAGTATCTATCTGAAAGGTTATAG 3612 0.4145 MDFDGSVKDSVLTTTQVSIGGFDSDVKASDLVSYLESKIGYVDRCRLKTSCTPPESYPEFTMTDTKQIEITDDYKKVAPHAFVHFTLPDSATEALNAAGRCDLILNGKVLKVISGPQNPNFLNQRRRTEAPFKMSDVIVEIGTLVSLADFTVAWRGCDKGVNFLVDPFDKMCKICFNRDTVFSFKGIGKQAVIKCDFKMGFLIRDIEEIQRYDDTSHLVVLLRLASSPLVWYRTADDDIDESVTIDLLDDDDPWIRTTDFTPSAAIGRCNYYRISIPPRHGAKLNKALEYLRRQRVPRIPLNRPPKIQNEPDFGVPMSDAFFYIDSQKDISFDIMFLINAIVHRGIFNQYSLSNKFFELLKNQPKDVNVAALKHICTFKHPLFDAAKRLEAVQKWLLKNPKIYQISKQFDGVMEVRRLVVTPTKAYCISPEVELSNRVLRRFREVSDRFLRVTFMDEGQQTLNNYALNYYVAPIVKEITSNSFPQKTRIYKRVKTILEDGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDKDITCDDIRNWMGRFNQKNVAKCAARMGQCFSSTYASVEVPANEVNSMLPDVERNNYVFSDGIGIITTDLAVEVAEKLKLDKAPSAYQIRYAGFKGVVACWPAKGDGIKLSLRPSMNKFQSTHTTLEICAWTRFQPGFLNRQIITLLSALDVPDEIFWKMQEGMLSSLNQMLVDRDVAYDVLTKSCAEHGNAAAIMLSCGFSPKTEPHLRGMLNSIRAAQLWGLREKSRIFVSSGRWLMGVLDELGVLEQGQCFVQVSTPSLENCFSKHGSRFSETKTVHVVKGTVVIAKNPCLHPGDVRVLEAVDVPDLHHLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDGNLIPPSKRSWPPMEYAAQESRLQTRQVTVQDIIDFFVRNMVNEQLGSICNAHVVHADSSDYGALDENCVHLAELAATAVDFPKTGKLVTMPPNLKPKLYPDFMGKEHHQSYKSKKILGRLYRRIKDAYDKDIDAPEFNCVSSDILYDTDLEVPGSSEFIADAWEQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQIFEKLKSDVGELSDKEKNLLYEQKASAWYQVTYHPKWVKKSLDLQLKSSDNQSADSLGNMVMLSFPWIAVDYLACTKTRHRRVKDFDSTKQVDSLAKYLSERL 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07438 1203 Pfam RNA dependent RNA polymerase 420 1000 IPR007855 GO:0003968
Mepo3g07438 1203 PANTHER RNA-DEPENDENT RNA POLYMERASE 14 1197 IPR007855 GO:0003968
Mepo3g07438 1203 CDD RRM_SF 17 112 - -
Mepo3g07438 1203 SUPERFAMILY RNA-binding domain, RBD 10 120 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07438 Mepo-Chr3 87765335 87770303 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07438 K11699 - gmx:100795178 2019.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07438 3 87765335 87770303 Mepo3g07438 3 87765335 87770303 ECH