Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07434 ATGTCTAAAGTTCTCAGCTTTACCGGAGGTGATGATTTTTGTACCGGAAGGTCGATGTACCTTAACCCGAAGGAGGCGGGTCTCTTCTTGTCTCTTGGCCGTCAAGAATATGCTTACAGACCTCTTCAAAAGAGATCTCGCTTCAATGTTCCATTTGATTTCAGTGGAGAAAAATGGTTTGAGCAGAAGCTAGAGACATCTATTGAAACATTGCCTGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGAAGGACAAGATAGGAGCTTATGTGCTTCTGTATCCAAGCGCTGGCTTATGCTTCTAAGCAATATTTCCAAGAATGAAATCTGCAGCAACGCAAGTTCTGGAAACAAGGACAGTGACAATCAAGAATTTGGTGATGAAGGTTATCTTTCTCGAAGCTTGGAGGGGAAAAAGGCTACAGATGTTAGACTAGCTGCCATTGCTGTTGGCACACAATCTCGAGGAGGATTAGGGAAGCTTTCAATTCATGGAAGCAATCCAGATCGTGCGTTGACTGATGTAGGTCTCAAGGCAGTTGCTCATGGCTGCCCTTCTCTGAAGTCTTTCACTCTTTGGGATGTTGCTACCATTAGTGACGAAGGCTTGATCGAGATTGCTAATGGTTGTCATCAGATAGAGAATCTTGACCTATGCAAGTTGCCAACAATTTCTGACAAGGCTTTGATTGCAGTTGCAAAGCACTGTCCGAATCTGACTGAGTTATCGATAGAGTCATGTCCTAGCATCGGTAATGAAGGTCTACATGCTATTGGAAAGTTGTGTCCAAATCTAAGGTCCGTATCAATTAAAAACTGTCCTGGAGTTCGTGATCAGGGAATTGCTGGCCTTTTATGTTCAGCATCCATTATTCTAAAAAAGCTGACACTTGAATCGCTAGCTGTTTCTGATTACTCACTAGCAGTTATTGGACAATATGGCTTTGTAGTTACTGATCTTGTCCTAAATTTCCTTCCAAATGTCACCGAGAAAGGATTCTGGGTGATGGGTAATGGCCATGCACTGCAGCAACTAACGTCGCTCACAATTGGGCTGTGCCCTGGAGTAACAGATATTGGGCTTGAAGCTGTAGGAAAGGGTTGTCCAAATGTGAAAAACTTTCAGCTTCGTAGGTGTGCATTTCTGTCAGACAATGGGCTGGTATTGTTCACCAAGGCTGCTCCATCAATTGTGAGCCTACAATTGGAAGAGTGCCATAGGATTACCCAATTTGGGGTTGCCGGTGTCATTTTAAACCATGGTGCAAAATTGAAGGTTCTTACTCTGGTAAGCTGCTACGGGATCAAAGATCTGAATCTCAATTTGCCAGCAGTACCTCCATGTCAGACAATTTCGTCATTATCAATCCATAACTGTCCTGGAGTTGGTAATTTTACTCTCAACGTCCTTGGGAAGCTCTGTCCTATGCTTCAGTGTCTTGAATTGATTGGACTTGAGGGAATAACAGACCCAGGGTTTATTTCACTGCTTCAGAGGTCTAAGGCCAGTTTGGGTAATGTTAATCTAAGTGGTTGCATCAATCTAACAGATGTAGGAGTTTTGTCCATGGTCAAGTTGCATTGTTCGACTCTTGGAGTGCTAAACCTTAATGGTTGCAAAAAGATCGGGGATGCTTCCTTGACAGCAATTGCAGACAATTGCATTATCTTGTGTGATCTTGATGTTTCCAAGTGTGCAATCACCGATGCAGGGATTTCTGCCCTTACTCGTGGAGTCCTGTTCAATCTGGATGTACTTTCTTTGGCAGGTTGTTCATTGGTTTCAAACAAGAGCTTGTCTGCTTTGAAAAAATTGGGTGATTCCCTTGAGGGATTAAATATTAAAAATTGCAAGTCGATCAGCAGCCGCACAGTTAACAAGCTTGTGGAACATCTCTGGATGTGTGACATCCTCTTCTGA 1926 0.4315 MSKVLSFTGGDDFCTGRSMYLNPKEAGLFLSLGRQEYAYRPLQKRSRFNVPFDFSGEKWFEQKLETSIETLPDECLFEILRRLPEGQDRSLCASVSKRWLMLLSNISKNEICSNASSGNKDSDNQEFGDEGYLSRSLEGKKATDVRLAAIAVGTQSRGGLGKLSIHGSNPDRALTDVGLKAVAHGCPSLKSFTLWDVATISDEGLIEIANGCHQIENLDLCKLPTISDKALIAVAKHCPNLTELSIESCPSIGNEGLHAIGKLCPNLRSVSIKNCPGVRDQGIAGLLCSASIILKKLTLESLAVSDYSLAVIGQYGFVVTDLVLNFLPNVTEKGFWVMGNGHALQQLTSLTIGLCPGVTDIGLEAVGKGCPNVKNFQLRRCAFLSDNGLVLFTKAAPSIVSLQLEECHRITQFGVAGVILNHGAKLKVLTLVSCYGIKDLNLNLPAVPPCQTISSLSIHNCPGVGNFTLNVLGKLCPMLQCLELIGLEGITDPGFISLLQRSKASLGNVNLSGCINLTDVGVLSMVKLHCSTLGVLNLNGCKKIGDASLTAIADNCIILCDLDVSKCAITDAGISALTRGVLFNLDVLSLAGCSLVSNKSLSALKKLGDSLEGLNIKNCKSISSRTVNKLVEHLWMCDILF 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07434 641 SUPERFAMILY RNI-like 342 600 - -
Mepo3g07434 641 Gene3D Ribonuclease Inhibitor 61 289 IPR032675 -
Mepo3g07434 641 Gene3D Ribonuclease Inhibitor 290 445 IPR032675 -
Mepo3g07434 641 Gene3D Ribonuclease Inhibitor 446 640 IPR032675 -
Mepo3g07434 641 CDD F-box_AtTIR1-like 71 102 - -
Mepo3g07434 641 SMART LRR_CC_2 370 395 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 344 369 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 450 475 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 503 528 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 608 633 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 238 263 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 476 501 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 530 555 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 582 607 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 186 211 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 212 237 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 264 289 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 396 421 IPR006553 -
Mepo3g07434 641 SMART LRR_CC_2 556 580 IPR006553 -
Mepo3g07434 641 FunFam EIN3-binding F-box protein 1 251 441 - -
Mepo3g07434 641 PANTHER UNCHARACTERIZED 430 624 - -
Mepo3g07434 641 Pfam Leucine Rich repeat 562 577 IPR001611 GO:0005515
Mepo3g07434 641 Pfam Leucine Rich repeat 529 553 IPR001611 GO:0005515
Mepo3g07434 641 Pfam Leucine Rich repeat 237 260 IPR001611 GO:0005515
Mepo3g07434 641 Pfam F-box domain 71 107 IPR001810 GO:0005515
Mepo3g07434 641 FunFam EIN3-binding F-box protein 1 132 250 - -
Mepo3g07434 641 FunFam EIN3-binding F-box protein 1 502 639 - -
Mepo3g07434 641 SUPERFAMILY RNI-like 173 416 - -
Mepo3g07434 641 SMART fbox_2 71 112 IPR001810 GO:0005515
Mepo3g07434 641 SUPERFAMILY F-box domain 66 104 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07434 Mepo-Chr3 87728881 87732323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07434 K14515 - gmx:547505 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07434 3 87728881 87732323 Mepo3g07434 3 87728881 87732323 ECH
Mepo4g00635 4 8658889 8662357 Mepo3g07434 3 87728881 87732323 PCT