Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07414 ATGGGATTCATCAGTGGCATGATCATTGGTATTATGATTGGTATCATATTGGTTGTCGCTTTCACTCGTCAAGAAAGTACTCGATCCAAGCGCCGCACAGATTTGGCAAAGACAATAGCAAAGTTTGCGAGGATGACAGTGGAGGATTCGAGAAAACTTCTACCTCCAAATTTTTATCCGTCATGGGTGTTAAATTGGCTTAATAGCCATTTAGAAAAGATTTGGCCATTTGTCAATGAGGCAGCGACAGAATTGGTAAAAAGCAATGTCGAACCAATTCTTGAACAGTATAGGCCAGTGGTTTTGTCTTCTCTCACGTTTTCAACGTTTACACTCGGTAGTGTAGCTCCACAATTTACAGGAATTTCAATTATTGAAGAGGATAGTGGGCCCAATGGAGTCACAATGGAGTTTGACATGCAGTGGGATGGTAACCCGGATATTGTTCTTTCCATTAAAACCAAAGTTGGTATTGTACTACCTGTGCAGGTAAAAAATATTGGATTCACTGGGGTTTTCAGGTTGATCTTCAAACCTCTTGTAGCTGAATTTCCTGCTTTTGGAGCCGTATGTTTTTCTCTAAGAAAAAAGAAAGCTTTGGATTTTACTCTTAAGGTTGTTGGTGGTGATATTTCAACCTTACCAGGGGTATCTGAAGCTATTGAGGAAACAATTCGAGATGCCATTGAAGACTCTATAACTTGGCCGATACGTAAAGTCATACCAATTATACCAGGAGATTATAGTAACCTAGAATTGAAACCCGTTGGAACACTAGATGTAAAACTAGTGCAGGCAAAGAACTTATCGAATAAAGATATAATTGGGAAATCTGATCCTTTTGCTGTGGTATTTGTACGCCCACTCCGTGACAAAACCAAAACCAGTAAGATAATTAACAACCAGTTGAACCCAATATGGAATGAGCACTTTGAATTCATTATTGAAGACGAATCAACACAACACTTGACCATAAGAATCTTTGATGATGAAGGCATTCAAGCAGCTGAGCTTATTGGTTGTGCCCAAGTTTCCCTAAAGGAACTTGAACCTGGTAAAGTTAAGGATGTATGGTTGAAATTGGTTAAAGATTTAGAGATCCACAAAGATAACAAATATAGGGGTGAGGTGCACTTGGAGCTATTGTATTGCCCATGTGGAGTTGAGAACACTTTTAAGAGCCCTTTTGTCCGTGATTACTCACTAACTACGTTTGAGAAGACCTTGAAGAATGGAGCTAGTGATGGAGAGGAAGAAGATAATTCAATATCATCATCACGGAGGAAAAGCAACGTGATTGTAAGAGGAGTTCTATCAGTCACTGTAATTTCAGCTGAAGACTTACCAATAGTAGATTTTATGGGCAAGGCTGACCCATTTGTTGTCCTTGCATTGAAAAAATCAGAAAAGAAACAAAAGACCCGAGTTGTAAATGAAACTCTAAATCCAGTATGGAATCAAACATTTGACTTCGTTGTGGAGGATGGATTACACGACATGCTAATTGTTGAACTATGGGATCATGACACCTTTGGAAAGGAAAAAATGGGAAAAGTGATCATGACACTAACCAAGGTCATATTGGAAGGGGAATACGACGAAACATTTATTTTGGATGATGCTAAATCCGGAAAGATTAATTTGCATCTAAGGTGGACTCCACAACACAAGTATCGGGAACCTTAA 1686 0.3897 MGFISGMIIGIMIGIILVVAFTRQESTRSKRRTDLAKTIAKFARMTVEDSRKLLPPNFYPSWVLNWLNSHLEKIWPFVNEAATELVKSNVEPILEQYRPVVLSSLTFSTFTLGSVAPQFTGISIIEEDSGPNGVTMEFDMQWDGNPDIVLSIKTKVGIVLPVQVKNIGFTGVFRLIFKPLVAEFPAFGAVCFSLRKKKALDFTLKVVGGDISTLPGVSEAIEETIRDAIEDSITWPIRKVIPIIPGDYSNLELKPVGTLDVKLVQAKNLSNKDIIGKSDPFAVVFVRPLRDKTKTSKIINNQLNPIWNEHFEFIIEDESTQHLTIRIFDDEGIQAAELIGCAQVSLKELEPGKVKDVWLKLVKDLEIHKDNKYRGEVHLELLYCPCGVENTFKSPFVRDYSLTTFEKTLKNGASDGEEEDNSISSSRRKSNVIVRGVLSVTVISAEDLPIVDFMGKADPFVVLALKKSEKKQKTRVVNETLNPVWNQTFDFVVEDGLHDMLIVELWDHDTFGKEKMGKVIMTLTKVILEGEYDETFILDDAKSGKINLHLRWTPQHKYREP 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07414 561 CDD C2 438 534 - -
Mepo3g07414 561 ProSiteProfiles C2 domain profile. 238 359 IPR000008 -
Mepo3g07414 561 SMART C2_3c 437 535 IPR000008 -
Mepo3g07414 561 SMART C2_3c 258 358 IPR000008 -
Mepo3g07414 561 Pfam C2 domain 257 361 IPR000008 -
Mepo3g07414 561 Pfam C2 domain 436 536 IPR000008 -
Mepo3g07414 561 PRINTS C2 domain signature 501 509 IPR000008 -
Mepo3g07414 561 PRINTS C2 domain signature 453 465 IPR000008 -
Mepo3g07414 561 PRINTS C2 domain signature 479 492 IPR000008 -
Mepo3g07414 561 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 552 IPR045050 GO:0008289
Mepo3g07414 561 CDD SMP_SYT 60 243 - -
Mepo3g07414 561 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 60 244 IPR031468 GO:0008289
Mepo3g07414 561 Gene3D C2 domain 253 391 IPR035892 -
Mepo3g07414 561 Gene3D C2 domain 433 560 IPR035892 -
Mepo3g07414 561 FunFam Extended synaptotagmin-2 417 556 - -
Mepo3g07414 561 FunFam Plant synaptotagmin 252 394 - -
Mepo3g07414 561 ProSiteProfiles C2 domain profile. 417 536 IPR000008 -
Mepo3g07414 561 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 255 386 IPR035892 -
Mepo3g07414 561 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 65 243 IPR039010 -
Mepo3g07414 561 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 435 554 IPR035892 -
Mepo3g07414 561 CDD C2 259 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07414 Mepo-Chr3 87535242 87541936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07414 253 502 Lipid Metabolism Gene Families AT3G61300 24.324 1.04e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07414 - - gmx:100787972 919.072