Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07353 ATGGGAGATATAGACTTGCTATACAAACTGATTCAAATGGATCCATACATCTTAGAACGCTATAATTTAATACCATTTGTTGATACTCCTTTGCATATTGCTGCAGCTTCTGGGCATGCAAGTTTTGCCACTGAGATTATGAGACTAAAACCTGCATTTGCTTGGAAGCTAAACGAGTATGGACTCAGTCCCATACACCTTGCTTTACAAAACAAATATCACAGAATGGTTTGTCGCTTTGTAGATATTAATAAAGACCTTGTCCGAATCAAAGGGAGAGAGGGTCTAACTCCTTTCCATATTGCTGCCAAAACTGGAAATTTTGATCTTATAGTTAAATTCTTGTCAGTTTGTCCAGGTTGTATTGAAGATGTTACAGTTCGAAGTGAGACTGCTCTGCATATTGCTGTGAAATATAAGCAGTTTCATGTTCTTGAGATCTTGCTTGGTTGGCTTCGAAGGACATGCCACAGACGTTCTCACCACAAGGAAAAACGGGTTCTGAATTGGGAGGATGAAGCAGGAAACACCATCCTGCACATGTCAGTTCTCAATAGCTTCCCACAGGCAGTTGGATTGTTAATAGATAGCAACATAGACATAAATGCCAAGAATTTAGATGAACAAACAGCATTGGACATAGTGGAGCAGATTCAGAGCCAAGTTTATAGTGCAGAAATGAAGGACATGTTGATCAAAGCAGGAGCTTTACATGGTTTTTCACTTGCTCCTACTCCACTTCACGAAGAGCTACGATCAAAAATCACATTTAACGAGAGAATAGCAATTTGTGTTACTCGTTTAAGAAGGAGAATTTCAAGTGACACAAGAAACGCTTTGTTAGTAGTTGCTATTCTTTTCGCAACAAGTGCATATGAAGCAACACTTAACCCTCCAGCTGGTGGAGGGAAATTAGTGGTGATGAAAATGCGAACGTACTTCTTAGGGTTTTGGTCGATTAATACATTTTCATTTTATGTTTCAATTTTGATGATGTGTATATTAATGCCAAGAGGACGTATAAGTGTTATAGTGACATGTCCACTTGCTCTATTCTGTGGTTGTTATATGTTTTCCATGTTAGTTATAGCACCAAGCTATACATTTGGAATTGTTACTGTGGCTATTCCATGTATACTTGTGGCAGTGTATTTTTGGGGAGCTATGATATACATTACATTAGCCCAGAAGGTTCGAATGTATGGTCGTGAATGGGAAGATGTATCCAAGTTTTCAGAAGGAAACAAATGGTAA 1254 0.3844 MGDIDLLYKLIQMDPYILERYNLIPFVDTPLHIAAASGHASFATEIMRLKPAFAWKLNEYGLSPIHLALQNKYHRMVCRFVDINKDLVRIKGREGLTPFHIAAKTGNFDLIVKFLSVCPGCIEDVTVRSETALHIAVKYKQFHVLEILLGWLRRTCHRRSHHKEKRVLNWEDEAGNTILHMSVLNSFPQAVGLLIDSNIDINAKNLDEQTALDIVEQIQSQVYSAEMKDMLIKAGALHGFSLAPTPLHEELRSKITFNERIAICVTRLRRRISSDTRNALLVVAILFATSAYEATLNPPAGGGKLVVMKMRTYFLGFWSINTFSFYVSILMMCILMPRGRISVIVTCPLALFCGCYMFSMLVIAPSYTFGIVTVAIPCILVAVYFWGAMIYITLAQKVRMYGREWEDVSKFSEGNKW 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07353 417 ProSiteProfiles Ankyrin repeat profile. 94 115 IPR002110 GO:0005515
Mepo3g07353 417 Pfam Ankyrin repeats (3 copies) 100 205 IPR002110 GO:0005515
Mepo3g07353 417 ProSiteProfiles Ankyrin repeat profile. 174 206 IPR002110 GO:0005515
Mepo3g07353 417 SMART ANK_2a 94 124 IPR002110 GO:0005515
Mepo3g07353 417 SMART ANK_2a 60 89 IPR002110 GO:0005515
Mepo3g07353 417 SMART ANK_2a 26 55 IPR002110 GO:0005515
Mepo3g07353 417 SMART ANK_2a 128 158 IPR002110 GO:0005515
Mepo3g07353 417 SMART ANK_2a 174 203 IPR002110 GO:0005515
Mepo3g07353 417 PANTHER HOMEOBOX PROTEIN WARIAI 2 374 - -
Mepo3g07353 417 Gene3D - 5 253 IPR036770 -
Mepo3g07353 417 ProSiteProfiles Ankyrin repeat region circular profile. 94 115 - -
Mepo3g07353 417 SUPERFAMILY Ankyrin repeat 2 219 IPR036770 -
Mepo3g07353 417 Pfam Domain of unknown function 274 373 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07353 Mepo-Chr3 86987343 86989067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07353 1 301 Miscellaneous Gene Families AT4G10720 44.224 4.21e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07353 - - gmx:100790227 574.318