Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07345 ATGGCTACTAACGAAGGTGACATGTTCTCAGCAGAGATTGTGAACCGTGGGATTGAATCATCGGGTCCGAACGCCGGTTCATTGACGTTCTCCGTTCGTGTTCGGAGACGGTTGCCAGATTTTCTTCAATCTGTGAACCTTAAGTATGTGAAATTGGGTTACCATTATCTGATAAACCATGGTGTTTATTTGTTCACTATACCAATTCTACTTGTTGTGTTTAGTGCTGAGGTTGGTAGTCTTAGCAAAGAAGATCTTTGGAAGAAGATTTGGGAAGATGCAACTTATGATCTTGCATCTGTTCTCTCTTCTCTTGCTGTCTTTGTTTTCACTTTCACTCTTTACTTCATGTCAAGGCCACGTCCTATTTATCTCATTGATTTTGCATGCTATCAACCTGATGATGAACTCAAGGTATCTAGGGAGCAATTGATAGAGCTAGCAAGAAAATCAGGAAAATTTGATGAAGGAAGTCTAGAATTCCAAAAGAGAATAGTAATGTCATCAGGAATAGGTGATGAAACATACATTCCAAGATCAGTGATAGCATCAAGTGAAAACACAGCAACAATGAAAGAAGGTAGAGCTGAGGCATCAATGGTTATGTTTGGAGCACTTGATGAACTCTTTGAAAAAACAGGAATTAGACCAAAAGATGTTGGTGTTCTTGTAGTAAATTGTAGCATATTCAACCCAACACCATCATTGTCAGCTATGATTATAAATCATTATAAGATGAGAGGAAATATTTTGAGTTATAATCTTGGTGGTATGGGTTGTAGTGCTGGAATTATTGCTGTTGATTTGGCTAGGGATATACTTCAATCTAATCCTGGTAACTATGCTGTTGTTGTGAGTACTGAAATGGTTGGATTTAATTGGTATCAAGGAAAAGAAAGATCAATGCTTATTCCAAATTGTTTCTTTCGTATGGGTTGTTCTGCTGCTTTGCTCTCTAACCGTCGTCGTGATTTTAGCCGCGCGAAATATCGTCTTGAACACATTGTTCGTACACATAAAGGTGCTGATGATCGTAGTTTCAGGTGTGTGTACCAAGAGGAAGACGATCAGAAATTCAAGGGAATCAAGATAAGCAAAGACTTAATTGAAATTGGTGGTGAAGCTCTCAAAACTAACATCACAACACTAGGACCATTGGTCCTACCCTTTTCAGAACAGCTTATTTTCTTTGCTACATTAGTGTGGAGGAACTTATTTGGTGGTGGAAAATCTGATAAAAATTCATCATCATCAAACAAGCCATACATTCCTAACTACAAACTAGCTTTTGAGCATTTCTGTGTGCATGCTGCTAGCAAAGCAATTCTTGATGAGCTTCAAAAGAATCTTGAATTGAGCGACAAGAACATGGAAGCTTCTAGAATGACGCTGCACCGATTCGGTAACACTTCTAGTAGCAGCATTTGGTATGAGCTTGCTTATATGGAAGCTAAGGAAAAAGTTAAAAGAGGAGACCGTGTTTGGCAACTTGCTTTTGGTTCTGGTTTTAAGTGTAACAGTGCTGTTTGGCGTTCGATGCGTCGTGTTACAAAACCTTCTTCTAGGAACCCTTGGCTTGACTGCATTGATGCATATCCTGCTTCTCTCAATTAA 1614 0.3891 MATNEGDMFSAEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGVYLFTIPILLVVFSAEVGSLSKEDLWKKIWEDATYDLASVLSSLAVFVFTFTLYFMSRPRPIYLIDFACYQPDDELKVSREQLIELARKSGKFDEGSLEFQKRIVMSSGIGDETYIPRSVIASSENTATMKEGRAEASMVMFGALDELFEKTGIRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPGNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSAALLSNRRRDFSRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGIKISKDLIEIGGEALKTNITTLGPLVLPFSEQLIFFATLVWRNLFGGGKSDKNSSSSNKPYIPNYKLAFEHFCVHAASKAILDELQKNLELSDKNMEASRMTLHRFGNTSSSSIWYELAYMEAKEKVKRGDRVWQLAFGSGFKCNSAVWRSMRRVTKPSSRNPWLDCIDAYPASLN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07345 537 Coils Coil 443 463 - -
Mepo3g07345 537 PANTHER 3-KETOACYL-COA SYNTHASE 101 534 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo3g07345 537 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 431 511 IPR013747 -
Mepo3g07345 537 SUPERFAMILY Thiolase-like 109 327 IPR016039 GO:0016746
Mepo3g07345 537 FunFam 3-ketoacyl-CoA synthase 133 512 - -
Mepo3g07345 537 PIRSF Very_long_ch_3-ktacl-CoA_syn 40 537 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo3g07345 537 CDD CHS_like 105 510 - -
Mepo3g07345 537 Gene3D - 125 513 IPR016039 GO:0016746
Mepo3g07345 537 Pfam FAE1/Type III polyketide synthase-like protein 115 404 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mepo3g07345 537 SUPERFAMILY Thiolase-like 333 512 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07345 Mepo-Chr3 86905310 86908929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07345 3 536 Miscellaneous Gene Families AT2G26250 74.773 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07345 K15397 - gmx:100778487 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07345 3 86905310 86908929 Mepo3g07345 3 86905310 86908929 ECH