Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07339 ATGGCCGATTCAGATCACACTCACTTCGACGACGACGACGATTTCGAAGTTCCTCTCACTCAAACTCAATCACCAATTCTCAAACCTCTCTCACAATCCAATAATCAAAATCAACGGCCATCCAAGAAACCCAAAACCAACAAAACGACACCGTTCCCTGGCAAAGAGAACATTCCCCCTTTCGAAGGTTACGATATCGGTCACAGTAGCTTGGATTTCGTTCCTTCTACATTAGATTCCGATTCCACCGTTTGTTCTTCTTCTGTTTCGGAGCTGAAAAAGAGTAACAAAAGCGCTTATTTCAGTAATTCATTAGAGTCTAGGTTAGTTGCGTCCAGAAAAAATGCTTTTGATTCGGAGGTGAATTTGTGTGATGAGTTTGGTAGTTCTGTTGATTGTCCTCTCTGCGGTGTTGATATTTCTAATTTAACGGAGGAACAGCGAAATCTTCATACTAATGATTGTCTTGATAAATCTGGAGAAGATGCTGCGCCTCCTAATAACGACGTAGGAGCTCAATTTGGGCCAAAAAACTCCCCCGTTGTTGAATGGATACGTGGTCTCGGGTTAGCTAAGTATGAAGAAGTTTTCGTTAGGGAAGAAGTTGATTGGGACACCTTGCAATGGCTGACAGAAGAGGATCTCTTAAACATGGGTATAACTGCACTTGGTCCCAGAAAAAAGATTGTACATGCTCTTTCAGAACTTAGAAGAGGAATCACCTTAGGAACCACATCTTCAAGTTCAAGTGAGAAACATGAGGATGCCGAGGTTGAGCCGAGAAGGACTAGAAATCAGAAAAGCAAATTGCAACATGACAAATCTGAGCGAAAAGTTGATGAAACTGTCAAGCCAGTAGCAAACAAATTAATTACTGAATATTTTCCGGGATTTGCTACCAGTGGGAAGAAAGTTTCTGCCCCTCCTGTAGAACGAAATGAAACGAACACCAGTGGCTCGTCTGATCGAAAGCGCAAAGCAAAAAATATTTCAACAAGTACAAAGATTCGCGACATTCCTAAATGGTGTGCCATACAAGGAACACCTTTCCGAGTGGATGCTTTCAAATACCTAAGAGGAGATTGTTCCCACTGGTTTCTCACACACTTCCACATGGACCATTATCAAGGTCTCACCAAGTCATTCAATCATGGAAAGATCTACTGCTCCTCTGTTACAGCCAGACTTGTAAATATGAACATAGGAATTCCATATGATAAATTACATATTTTGCCTCTAAACCAAAAGGTTGAAATAGCTGGTATTGGCGTGACTTGTTTGGATGCCAACCATTGTCCAGGTTCCATAATTATACTCTTTGAACCTCCAAATGGTAAGGCAGTACTTCATACGGGTGATTTTCGTTACAGTGAAGAAATGGCAAACAATCCTTTACTGCGGACATGTCCTATTCACACTTTAATTCTTGACACCACATACTGCAACCCACAGTATGACTTTCCAAAACAAGAGGCTGTAATACAATTTGTTATTGATGCCATTCAAGCAGAAGCTTTTAATCCCCGGACTCTTTTTCTGATTGGCAGCTATACAATTGGAAAAGAAAGACTATTCTTGGAGGTTGCTCGTTCGCTTCGCCAAAAAGTGTATGTGACAGCAGCAAAGTTACGCCTTTTAAAATGTTTGGAGTTTACAGAGGAGGATATGCAGTGGTTTACTTCAAATGAGCATGAAAGCAATATTCATGTTGCCCCTATGTGGACACTTGCAAGCTTCAAAAGATTGAAGCACATATCAAGTCAATATGCGAGTCGGTTCAGCCTTATAGTTGCTTTCTCTCCTACTGGTTGGACATTTGGCAAAGGTAAAAAGAAGTCTCCCGGAAGAAGGTGGCAGCAGGGTACCATTATAAGGTACGAGGTTCCTTACAGTGAGCATTGCAGCTTTACAGAACTCAAAGAGTTTGTAAATTTTGTATCTCCCGATAACATTATACCAAGTGTGAATAATGATGGACCAGAATCTGCCGATGCAATGGTTTCTCTCATGTCAACCTGA 2019 0.4121 MADSDHTHFDDDDDFEVPLTQTQSPILKPLSQSNNQNQRPSKKPKTNKTTPFPGKENIPPFEGYDIGHSSLDFVPSTLDSDSTVCSSSVSELKKSNKSAYFSNSLESRLVASRKNAFDSEVNLCDEFGSSVDCPLCGVDISNLTEEQRNLHTNDCLDKSGEDAAPPNNDVGAQFGPKNSPVVEWIRGLGLAKYEEVFVREEVDWDTLQWLTEEDLLNMGITALGPRKKIVHALSELRRGITLGTTSSSSSEKHEDAEVEPRRTRNQKSKLQHDKSERKVDETVKPVANKLITEYFPGFATSGKKVSAPPVERNETNTSGSSDRKRKAKNISTSTKIRDIPKWCAIQGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTKSFNHGKIYCSSVTARLVNMNIGIPYDKLHILPLNQKVEIAGIGVTCLDANHCPGSIIILFEPPNGKAVLHTGDFRYSEEMANNPLLRTCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLRQKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVNFVSPDNIIPSVNNDGPESADAMVSLMST 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07339 672 ProSiteProfiles SAM domain profile. 176 239 IPR001660 GO:0005515
Mepo3g07339 672 FunFam DNA ligase 6 345 503 - -
Mepo3g07339 672 MobiDBLite consensus disorder prediction 250 281 - -
Mepo3g07339 672 Pfam DNA repair metallo-beta-lactamase 554 658 IPR011084 -
Mepo3g07339 672 MobiDBLite consensus disorder prediction 241 281 - -
Mepo3g07339 672 MobiDBLite consensus disorder prediction 1 15 - -
Mepo3g07339 672 Pfam Beta-lactamase superfamily domain 366 485 IPR001279 -
Mepo3g07339 672 SMART Lactamase_B_5a 330 485 IPR001279 -
Mepo3g07339 672 Pfam SAM domain (Sterile alpha motif) 179 237 IPR001660 GO:0005515
Mepo3g07339 672 CDD SAM_superfamily 181 235 - -
Mepo3g07339 672 MobiDBLite consensus disorder prediction 1 64 - -
Mepo3g07339 672 SUPERFAMILY Metallo-hydrolase/oxidoreductase 350 654 IPR036866 -
Mepo3g07339 672 CDD SNM1A-1C-like_MBL-fold 319 483 - -
Mepo3g07339 672 Gene3D - 486 633 - -
Mepo3g07339 672 FunFam DNA cross-link repair 1A protein 486 633 - -
Mepo3g07339 672 MobiDBLite consensus disorder prediction 317 331 - -
Mepo3g07339 672 Gene3D - 175 242 IPR013761 -
Mepo3g07339 672 MobiDBLite consensus disorder prediction 302 331 - -
Mepo3g07339 672 SMART SAM_4 173 239 IPR001660 GO:0005515
Mepo3g07339 672 MobiDBLite consensus disorder prediction 18 53 - -
Mepo3g07339 672 SUPERFAMILY SAM/Pointed domain 179 238 IPR013761 -
Mepo3g07339 672 Gene3D - 345 655 IPR036866 -
Mepo3g07339 672 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 334 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07339 Mepo-Chr3 86862287 86868939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07339 178 233 Glycosyltransferase AT3G07170 46.429 4.17e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07339 K15340 - gmx:100816321 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07339 3 86862287 86868939 Mepo3g07339 3 86862287 86868939 ECH