Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07338 ATGGCGGCGGAGGAAGGGTGGTGTGTGGTCACAGGTGGTCGAGGCTTTGCTGCTCGACATTTGGTTGAAATGCTAATTCGATCGAACACCTACTGTGTCCGCATTGCCGATTTGGGACCCACCATTGAACTTGAACCCTCCGAGCAATTAGGTCTTCTCGGTCAAGCTTTGCACTCTGGTCGTGCTCAGTATGTCTCCGTTGATCTTCGCAACAAAGATCAACTCTTAAAAGCATTTGAAGGAGTCGAGGCTGTTTTCCATATGGCTGCACCAAATTCTTCTATAAACAACTACCAGCTTCATCATTCCGTCAATGTTGAAGGAACAAAAAATGTTATTGATGCTTGTGTGGAGTTAAAAGTGAAGAGACTCATTTATACTAGTTCTCCAAGTGTTGTTTTTGATGGAATTCATGGAATTCATAACGGAAGTGAATCGTTGCCTTATCCACCTTCGCATAATGATCATTACTCAGCAACTAAAGCCGAGGGTGAGGGATTGGTTATTAAGGCTAATGGGACTAGCGGACTCCTGACATGCTGCATACGCCCTAGCAGCATTTTTGGACCTGGTGATAAACTGTTGGTGCCTTCATTGGTTGATGCTGCAAAGGCAGGGAAATCCAAGTTCATTGTTGGTGATGGCAACAACGTATACGATTTCACATATGTTGAAAATGTGGCTCATGCCCACGTATGTGCTGATCGAGCTCTAGCTTCAGAGGGAACCGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATCACGAATATGGAACCTATAAAGTTTTGGGAGTTCATGTCTCTAATTTTGGAAGGCCTCGGATATCAAAGGCCAAGCATAAAGATCCCTGTCTTTGTTATCATGCCAATTGCACATCTGGTGGAGTGGATATATAGGCTGCTTGGCCCATATGGAATGAAGGTGCCTCAGCTGACCCCTTCAAGAATAAGACTCACATCTTGCACCAGATCTTTTGATTGCTCAAAAGCAAAGGACCGCCTTGACTATGCACCCATCATACCTCTACAGGAGGGCATACGTAGGACAATCGAATCATATCCACATTTGAGGGCTGAGAATCAACTTAAGTCTAAAAGAGAAGGTCCCTCCAAAGCTTCTGTATATCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGACAAAAAACAAACTTTCACTACATTGTTAGTCCTGATAGCAATATATGTCAACTTCATTGCATCTGAGAATACCTTCATTACTGCTCTTACGAAGCTTCTATTATACTCATCAATCGGTTTATTCATTCATGGCATTCTTCCTGCAAAAATATTGGGGTACACTGTTGAGAAAATGCCCACATCATGGTTTCACTTATCAGAAGATATTTCAAATCAAATTGCTTTCTCAGTTGCCTCATCTTGGAATTTTGCTGTGAATGCATTAAAATCCCTTGCAGAAGGGAATAATTGGGTGATGTTTTTCAAGGTTGTTTTCTCTTTGCTCGTTCTTAGCTTCCTGGGAGCGTTTTCACTTAAGAACTTGTATACCATAGGACTCACCTTAGCATTTACAGCTTTCTACGTTTATGAAAAGAAGGAGGAAGACATTGACAGCATATTTTTAAAATCACATGCTTTTGGATGCAAATTGATATCTGATCTTACCAAGAAGTTTGTTACTTCAAAGATTGATTGA 1686 0.417 MAAEEGWCVVTGGRGFAARHLVEMLIRSNTYCVRIADLGPTIELEPSEQLGLLGQALHSGRAQYVSVDLRNKDQLLKAFEGVEAVFHMAAPNSSINNYQLHHSVNVEGTKNVIDACVELKVKRLIYTSSPSVVFDGIHGIHNGSESLPYPPSHNDHYSATKAEGEGLVIKANGTSGLLTCCIRPSSIFGPGDKLLVPSLVDAAKAGKSKFIVGDGNNVYDFTYVENVAHAHVCADRALASEGTVSEKAAGEAYFITNMEPIKFWEFMSLILEGLGYQRPSIKIPVFVIMPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLTSCTRSFDCSKAKDRLDYAPIIPLQEGIRRTIESYPHLRAENQLKSKREGPSKASVYLGSGRVADTLLWKDKKQTFTTLLVLIAIYVNFIASENTFITALTKLLLYSSIGLFIHGILPAKILGYTVEKMPTSWFHLSEDISNQIAFSVASSWNFAVNALKSLAEGNNWVMFFKVVFSLLVLSFLGAFSLKNLYTIGLTLAFTAFYVYEKKEEDIDSIFLKSHAFGCKLISDLTKKFVTSKID 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07338 561 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
Mepo3g07338 561 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 354 IPR036291 -
Mepo3g07338 561 FunFam Reticulon-like protein 1 359 - -
Mepo3g07338 561 Gene3D - 1 358 - -
Mepo3g07338 561 Pfam Reticulon 382 537 IPR003388 -
Mepo3g07338 561 ProSiteProfiles Reticulon domain profile. 382 555 IPR003388 -
Mepo3g07338 561 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 8 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07338 Mepo-Chr3 86849157 86856018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07338 9 371 Lipid Metabolism Gene Families AT2G33630 31.234 1.78e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07338 K23558 - gmx:100816854 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07338 3 86849157 86856018 Mepo3g07338 3 86849157 86856018 ECH