Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07325 ATGGATTACATATTGGGGAAAAACCCAGAAGGAAGATCATACATGGTAGGATTCGGGAAAAATCCACCCACACAAGCTCACCATAGAGGTGCTTCAGTGCCAAAGTTGTCACCAAACGAAGATATAAATTGTCCTATGAGCTTTTCGAAATGGCTGAAAAGAGATGGACCAAATCCACATGAGCTAACTGGAGCTATTGTAGGTGGACCTGACATCAATGACAAATTCGATGATAATCGTACAGATTCACCTAAGACTGAACCTTGCACATATGTTAATTCTCTTGCAACTGGTGCTCTAGTAAAGCTTGCTTCTTTGGGTTAA 324 0.4105 MDYILGKNPEGRSYMVGFGKNPPTQAHHRGASVPKLSPNEDINCPMSFSKWLKRDGPNPHELTGAIVGGPDINDKFDDNRTDSPKTEPCTYVNSLATGALVKLASLG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07325 107 SUPERFAMILY Six-hairpin glycosidases 1 104 IPR008928 GO:0005975
Mepo3g07325 107 Gene3D - 1 107 IPR012341 GO:0005975
Mepo3g07325 107 PANTHER ENDO-1,4-BETA-GLUCANASE 1 104 - -
Mepo3g07325 107 Pfam Glycosyl hydrolase family 9 1 100 IPR001701 GO:0004553|GO:0005975
Mepo3g07325 107 MobiDBLite consensus disorder prediction 65 88 - -
Mepo3g07325 107 MobiDBLite consensus disorder prediction 18 39 - -
Mepo3g07325 107 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 3 29 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07325 Mepo-Chr3 86744317 86744929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07325 1 105 Glycoside Hydrolase AT3G43860 64.762 8.07e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07325 K01179 - gmx:100811509 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07325 3 86744317 86744929 Mepo3g07325 3 86744317 86744929 ECH