Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07296 ATGCGAACGAAAAGTATGCGGAAGAAGAAGAAGGGTGGTGATGCTGATAAAGAAAATGAAGCAACATCGTCGAAGATGTTGAAAGGAGCAGAAAGATCAGCGTATTTCGCAAGAAGAGAAGCAGCGAAAGTATTGAAAACTGTACTCGAAGGAGATGCTAAGCGCCGTGCACTTGCTTCTATCAAAACCCTCGTTTATCATCCTTCTGTTAGAAACAAGAAAGCCACTTTTGCTCTCATCTGTCAAACCCTCAAACATCTTCCAATTATCAATGATGTCTTGCAAGCTGCTAAAATTCTTAATACTAAGTGGAAGAGGCAACAAGAATTGATTTATATCATTGTCTATGACATTCTTTTCGGTCAAGAAGTTCCGTTAGTTGGTGATGCAGAGAAGTACCTCATGCGCCACAAGGAAGCCCTACATTTACATCTGAAAAAGATTTTGTCACAGAAAAATGTGAAGACTGTTAAAGAGTTATTTGCTCTACATGAGGTTCCTGATGTTTCTGTACCTCGAAATGTTCGTGTGAATACACTTAAACTGGATGTTGATTCTGCCTTAGTTGAACTTCGGAAAAAATACTCGGTTCAAAAGGATGATTTACTGCATGACTTACTGATACTCCCTCCAGGAACCGATTTACATGATCATCCTCTTGTCAAAGACGGAAGCATATTTCTGCAAGGTAAGGCGAGCTCAATGGTGGCACTGGCCCTTAGCCCTGAACCAGGATGGGAGGTTCTTGATGCATGCGCTGCACCCGGCAACAAAACTGTCCACCTTGCTGCCCTCATGAAGAGAAAGGGTAGGATTATCGCATGTGAGCTGAAAAAGGAAAGGATTAAGCGCTTGAATGACACTATAAAGCTATCTGGGGCTACCAACATACAGGTTCTCAATGAGGATTTCTTGAACATAAATCCCAAAGACCCTTCATATTCTAAGGTAAAAGCTATTCTTTTGGATCCTTCCTGCTCTGGTTCTGGTACTGCCGCTTCTAGACTAGACCATTTGCTCCCATCTAAAGCGGCAGGTCAGGATGTGGATATGGAAAGATTGAACAAGCTTGCCGCTTTTCAGAGAAAAGCTCTTCAGCATGCCCTCCTTTTTCCAGCTTTGGAACGAGTTGTGTACAGTACATGTTCAATAAACCAAATCGAAAATGAAGATGTTGTGAAATCTGTTTTGCCCATAGCCAAGTCATACGGATTTCAACTAGTAAAGCCCTTCCCTGGGTGGCCTTGTCGAGGTCTTCCGGTATTTGAAGGCTCTGAACACCTGGTTCGAACAGATCCTGCCAAGCATGGCGAGGGTTTCTTCATTGCATTGTTTGCCAAGAAAGATGATGTTAACTTGTCGGTGAGGTCAAATAAAAATGACAATAGAACGCTACACAGTTCTACCAGAACTAGAAACGTGCGAAGAAAGCAACCAATTCACACTAATATGTTCAAAATGTGGTTATCTGGTCAACTGTACCGGCGTCACATACTAGACAATTCCTACGGTGGTCGAAATTCGAGGGATGAAAGAGCTGTCTAA 1545 0.4252 MRTKSMRKKKKGGDADKENEATSSKMLKGAERSAYFARREAAKVLKTVLEGDAKRRALASIKTLVYHPSVRNKKATFALICQTLKHLPIINDVLQAAKILNTKWKRQQELIYIIVYDILFGQEVPLVGDAEKYLMRHKEALHLHLKKILSQKNVKTVKELFALHEVPDVSVPRNVRVNTLKLDVDSALVELRKKYSVQKDDLLHDLLILPPGTDLHDHPLVKDGSIFLQGKASSMVALALSPEPGWEVLDACAAPGNKTVHLAALMKRKGRIIACELKKERIKRLNDTIKLSGATNIQVLNEDFLNINPKDPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDVDMERLNKLAAFQRKALQHALLFPALERVVYSTCSINQIENEDVVKSVLPIAKSYGFQLVKPFPGWPCRGLPVFEGSEHLVRTDPAKHGEGFFIALFAKKDDVNLSVRSNKNDNRTLHSSTRTRNVRRKQPIHTNMFKMWLSGQLYRRHILDNSYGGRNSRDERAV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07296 514 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g07296 514 MobiDBLite consensus disorder prediction 9 25 - -
Mepo3g07296 514 Gene3D Vaccinia Virus protein VP39 229 454 IPR029063 -
Mepo3g07296 514 PRINTS RNA (C5-cytosine) methyltransferase signature 374 390 IPR023267 GO:0001510
Mepo3g07296 514 PRINTS RNA (C5-cytosine) methyltransferase signature 318 330 IPR023267 GO:0001510
Mepo3g07296 514 PRINTS RNA (C5-cytosine) methyltransferase signature 430 447 IPR023267 GO:0001510
Mepo3g07296 514 PRINTS RNA (C5-cytosine) methyltransferase signature 220 234 IPR023267 GO:0001510
Mepo3g07296 514 PRINTS RNA (C5-cytosine) methyltransferase signature 249 259 IPR023267 GO:0001510
Mepo3g07296 514 Pfam 16S rRNA methyltransferase RsmB/F 238 445 IPR001678 GO:0008168
Mepo3g07296 514 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 163 448 IPR001678 GO:0008168
Mepo3g07296 514 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 42 448 IPR023267 GO:0001510
Mepo3g07296 514 CDD AdoMet_MTases 248 336 - -
Mepo3g07296 514 Gene3D Sun protein; domain 3 164 228 - -
Mepo3g07296 514 FunFam Methyltransferase NSUN5, putative 229 452 - -
Mepo3g07296 514 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 172 448 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07296 Mepo-Chr3 86515184 86520770 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07296 K15264 - gmx:100775620 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07296 3 86515184 86520770 Mepo3g07296 3 86515184 86520770 ECH