Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07264 ATGGCGGAAGAAGCACAGTACGCAACCCTAAAACGCAAATATGATGACCAACCCACCGCCACCGACATCGAACTCGAAGTCGCAAACGCAAAACAACGAGCTCAAGAAGTTGCCGCTCGTCTTCTCAGCGTCACCGGCGCTCCACCACTCTCCTACGATCCCAAACGAAACAAGTCCGATAACGGTGCTCCACAATCGGGATTTGATTCTTACGATTTGAAGCCGCAATATTCATCGCAACAAGGTAGTTATGGTTCTAGTAAGAAGATTGAGATACCTAATGGTAGGGTTGGTGTTCTAATTGGTAAAGGAGGTGAAACTATTAAGTATCTTCAGATGCAATCTGGTGCTAAGATTCAAGTTACTCGTGATATGGATGCTGATCCTAATTCTCACACTAGGATGGTTGAACTTATGGGTACTCCTGATGCTGTTTCTTCTGCTGAGAAACTTATCAACGAAGTACTTGCTGAGGCTGAAGCTGGGGCTTCTGGCGGTGGCACTAGACGGATGGTTGCACAATCTGGGGGTGATGAATTTGTGATGCAAATACCAAACAATAAGGTTGGCCTTATAATTGGTAAAGGAGGAGAAACAATAAAGAGTATGCAAGCTTCTACCGGAGCACGAATTCAGGTGATACCTTTGCATCCTCCCCCAGGTGATACATCAACAGAAAGAACATTAAAAATCGATGGGACCCCTGATCAAATTGAATCAGCAAAGCAATTGGTTAATCAAATCCTCACTGGTGAGAATCGTCTCAGAAGTTCAGGGAACTCAGGTGGTTATACTCAGCAAGGTTACCAATCCCGACCACCGTCTAGCTGGGCTCCTCCTGCTGCTCCTGTGCAACAAGCTGGTTATGGCTATGGGCAACCTGGATCATACTCTGGCCCACCACCACAGTATAACATGCCTCAGCCACCATATGCAGGCTATCCTCCTCAGCAACCCGGTGGATATTCTGCCAACTGGGACCAATCCACTGCACCATCTCACCAGCAGTCTACTCATGCAAGTGGTTATGATTATTACAATCAACAACCCCAGCAACAGCAAAATCCTGGGGGTCCTTCACAGCCAGCTGATGGGTCTGCATACAGTTACAGTCAACCTCCTTCCTCTGGTTATAGCCAACCAGGACAGGGTTATGGTCAGGAAAGCTATGGTGCGTATAATGCGCAACAATCTGGGTACGGTCAGCCACAAACATATGATCAGCAACAAGGTTATGGCTCTGCTCCCAGTTATGGCAGTGGGAGTAATCCAACCCAAGAAGGGCACACTTCCAACTATGGATCGCAAGCAGATACCTCTCAAACTTCCCAACCCACTACTGTTGCCCAGCAAGGCTATGCTACCAACCAACAAGGAACTCCTCAACCAGCTTATGCGGTAGCCCCTACCTCCCAAGCGGCCTATGGAAGTCAACCACAGTCTGGTTATGGACCTGGTTATGGTGCTCCTCCCTCTCAAAAGCCAAGTGCAAATCCACCTGTTTATGGTCAATCACAGTCACCTGGCACAGCAGGAGGCTATGGTCAGTCAGCATATCCCTCTAGCCAGGCCCCGCCTTCTGGGTATGCCCAGCCAGAGTTAGGCACTCAGAGAGCACCAGTGCAACCAGGGTATGGTTCGCAATCATATGGTGCTCCTCAAGGTGGCCAGCCTAGCTATGGCCAGACTCCACCGTCATATGGAAATAGTTCTTACGGTGCTGGTTATGCTCAGGCTCCAGCGTATGCTAGCGATGGAGCAACTGTACAGGCTGTTCCACAGGGCGGTGTTGCTAAAGTGTCACCCAAGAGTTGA 1815 0.4909 MAEEAQYATLKRKYDDQPTATDIELEVANAKQRAQEVAARLLSVTGAPPLSYDPKRNKSDNGAPQSGFDSYDLKPQYSSQQGSYGSSKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSHTRMVELMGTPDAVSSAEKLINEVLAEAEAGASGGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPLHPPPGDTSTERTLKIDGTPDQIESAKQLVNQILTGENRLRSSGNSGGYTQQGYQSRPPSSWAPPAAPVQQAGYGYGQPGSYSGPPPQYNMPQPPYAGYPPQQPGGYSANWDQSTAPSHQQSTHASGYDYYNQQPQQQQNPGGPSQPADGSAYSYSQPPSSGYSQPGQGYGQESYGAYNAQQSGYGQPQTYDQQQGYGSAPSYGSGSNPTQEGHTSNYGSQADTSQTSQPTTVAQQGYATNQQGTPQPAYAVAPTSQAAYGSQPQSGYGPGYGAPPSQKPSANPPVYGQSQSPGTAGGYGQSAYPSSQAPPSGYAQPELGTQRAPVQPGYGSQSYGAPQGGQPSYGQTPPSYGNSSYGAGYAQAPAYASDGATVQAVPQGGVAKVSPKS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07264 604 MobiDBLite consensus disorder prediction 321 479 - -
Mepo3g07264 604 MobiDBLite consensus disorder prediction 252 577 - -
Mepo3g07264 604 FunFam KH domain-containing protein 174 273 - -
Mepo3g07264 604 ProSiteProfiles Type-1 KH domain profile. 177 245 - -
Mepo3g07264 604 MobiDBLite consensus disorder prediction 1 20 - -
Mepo3g07264 604 MobiDBLite consensus disorder prediction 44 89 - -
Mepo3g07264 604 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 76 429 - -
Mepo3g07264 604 Gene3D K Homology domain, type 1 174 273 IPR036612 GO:0003723
Mepo3g07264 604 Gene3D K Homology domain, type 1 78 173 IPR036612 GO:0003723
Mepo3g07264 604 ProSiteProfiles Type-1 KH domain profile. 85 152 - -
Mepo3g07264 604 MobiDBLite consensus disorder prediction 498 530 - -
Mepo3g07264 604 Pfam KH domain 181 246 IPR004088 GO:0003723
Mepo3g07264 604 Pfam KH domain 88 154 IPR004088 GO:0003723
Mepo3g07264 604 MobiDBLite consensus disorder prediction 541 573 - -
Mepo3g07264 604 Coils Coil 20 40 - -
Mepo3g07264 604 MobiDBLite consensus disorder prediction 300 316 - -
Mepo3g07264 604 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 88 162 IPR036612 GO:0003723
Mepo3g07264 604 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 180 295 IPR036612 GO:0003723
Mepo3g07264 604 SMART kh_6 84 157 IPR004087 GO:0003676
Mepo3g07264 604 SMART kh_6 176 250 IPR004087 GO:0003676
Mepo3g07264 604 MobiDBLite consensus disorder prediction 58 88 - -
Mepo3g07264 604 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07264 Mepo-Chr3 86250843 86256525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07264 K13210 - gmx:100813135 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07264 3 86250843 86256525 Mepo3g07264 3 86250843 86256525 ECH