Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07242 ATGTTGTCTAGGAAGGCTAGTGAAGACTCTCATGGCCAAGACTCTTCTTACTTCATAGGATGGCAAGAGTACGAGAAGAATCCCTATCACCCAATTCATAATCCCACGGGAATCATTCAGATGGGACTTGCGGAGAATCAGCTTTCATTTGAACTTCTTGAATCATGGCTCTCAAGAAATTCTGATGCAGTGGAGATGAAGAAATTAGATGGGATATCCGTCTTTAAAGAACTTGCTCTATTCCAGGATTATCACGGCTTACCTGCTTTCAAAAATGAACTGGTGGAGTTTATGGCAAAAATAAGAGGAAATGTTATAAAATTTGATTCAGAGAATCTTGTCCTCGCAGCTGGCGCAACTTCTGCAAATGAGATTCTCATGTTTTGTCTTGCTGATCCTGGCGAAGCTTTCATTCTTCCCGCACCCTATTATCCTGGGTTCGACAGAGATCTTAAATGGCGTACAGGTGTTGAAATTGTTCCAATGCATTGTTCAAGTTCAAACGGTTTCAGAATCACATCCTCTGGTTTAGAACAAGCCTATCAACAAGCACAAAACCTTAACCTTAATGTCAAAGGTGTACTAATAACCAACCCTTCAAACCCATTAGGCATAACCATGACCAAAACAGAACTTAACAAACTAGTAGATTTTGCAATAGACAAAAACATTCACATAATAAGCGACGAAATCTACTCAGGTACTGTCTTTGACTCACCAAAATTTGTAAGCATCATGGAAGTTATTAACGAAAGAAGTCACGAAAACGATGAAATTTCAAAGCGTGTTCACATCGTTTATAGTCTCTCTAAAGACCTCGGTGTACCTGGTTTTCGTGTAGGAATGATATATTCAAACAACAAAATGGTTGTATCTACGGCTACCAAAATGTCAAGTTTTGGACTTATATCGTCACAAACTCAATATTTGCTAGCAAATTTACTTGGCGACAATGAATTTACTTTTAAATATATGGATGAGAATAAGAGGAGGTTAAAGAAACGAAAGAATATCCTTGTAACCGGTTTAAGAAATGCGGGGATTCCTTGTTTAAAGAGTAATGCTGGATTGTTCTGTTGGGTTGATATGAGGCATTTGTTGAGTTCTGCAACTTTCGAGGCAGAGAATGAGCTTTGGAAAAGGATTCTTTACCAAACTGGTTTGAATATATCTCCCGGATCTTCTTGTCATTGTTCTGAACCAGGGTGGTTTAGGATTTGCTTTGCTAATATGTCTCCAGAAGCTTTGCAAGTTGCAATGCGAAGGATTAAGATCTTTACAGATTCAAATTCAACCATGTTTTCTATTAAAAAACAATTTGTCACTAGTACTAATCCAATTATTATCACTACGGTAGAAGGGAAATTATTAATTGGGTTTTCTAGTTATCATGGAAAGAATAATCAGAAGCCAATTAATAATTTTCCTTCTAAAATAAAAAAATGA 1446 0.37 MLSRKASEDSHGQDSSYFIGWQEYEKNPYHPIHNPTGIIQMGLAENQLSFELLESWLSRNSDAVEMKKLDGISVFKELALFQDYHGLPAFKNELVEFMAKIRGNVIKFDSENLVLAAGATSANEILMFCLADPGEAFILPAPYYPGFDRDLKWRTGVEIVPMHCSSSNGFRITSSGLEQAYQQAQNLNLNVKGVLITNPSNPLGITMTKTELNKLVDFAIDKNIHIISDEIYSGTVFDSPKFVSIMEVINERSHENDEISKRVHIVYSLSKDLGVPGFRVGMIYSNNKMVVSTATKMSSFGLISSQTQYLLANLLGDNEFTFKYMDENKRRLKKRKNILVTGLRNAGIPCLKSNAGLFCWVDMRHLLSSATFEAENELWKRILYQTGLNISPGSSCHCSEPGWFRICFANMSPEALQVAMRRIKIFTDSNSTMFSIKKQFVTSTNPIIITTVEGKLLIGFSSYHGKNNQKPINNFPSKIKK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07242 481 Gene3D - 61 317 IPR015421 GO:0003824
Mepo3g07242 481 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 287 422 - -
Mepo3g07242 481 CDD AAT_like 81 424 - -
Mepo3g07242 481 Pfam Aminotransferase class I and II 39 423 IPR004839 GO:0009058|GO:0030170
Mepo3g07242 481 Gene3D Aspartate Aminotransferase, domain 1 27 422 IPR015422 GO:0003824
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 188 212 - -
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 262 286 - -
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 41 67 - -
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 134 155 - -
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 75 91 - -
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 224 247 - -
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 112 132 - -
Mepo3g07242 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 294 317 - -
Mepo3g07242 481 FunFam 1-aminocyclopropane-1-carboxylate synthase 3 61 317 - -
Mepo3g07242 481 SUPERFAMILY PLP-dependent transferases 9 424 IPR015424 -
Mepo3g07242 481 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 268 281 IPR004838 GO:0003824|GO:0009058|GO:0030170
Mepo3g07242 481 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07242 Mepo-Chr3 86069242 86071869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07242 K01762 - gmx:100803507 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07242 3 86069242 86071869 Mepo3g07242 3 86069242 86071869 ECH