Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07079 ATGAAATTCTCAGCAATTCACTGCTGCAGGCACATGCAACCTTACTGTGTGCCTTCAGCTTCTTCACTACCATGGATATCACCTCTTAACTTCACAAAACCTTTAGAACCTAAACTAGACCCACATCCTGAAATCGTTGTCGCGGAAACGAGGAAGAAGAGCAAATATATTACTCATGATGTTGCTATTAATTTGATCAAACGAGAGAAAGATCCGCAACATGCTTTGAAAATATTCAACATGGTATCTGAACAAAAGGGTTTTAATCACAACAATGCTACTTATGCAACGATTTTACAAAAGCTTGCTCAGTTTAAGAAGTTTCAAGCCGTTGATCGAGTTTTGCATCAGATGACGTATGAAGCTTGTAAGTTTCATGAAGGTGTATTTATTAACCTCATGAAGCATTACTCGAAATGTGGTTTTCATGAGAAAGTGTTTGATGCTTTTTTATCTATTCAGACAATTGTTCGTGAAAAGCCATCTCCTAAAGCTATCAGCTCTTGTCTCAATCTATTGGTTGATTCGAATCAGGTTGATTTGGCGCGGAAGTTGCTATTGTATGCCAAGAGGAGTCTAGTTTATAAGCCAAATGTATGCATTTTCAATATCTTGGTGAAGTACCATTGCAAAAAGGGGGATATTGATTCTGCTTTTGAAGTTGTCAAAGAAATGAGGAACTCTAAGTATTCATATCCTAATGTAATTACCTACTCAACCTTGATGGATGGTCTGTGCCGAAATGGAAGACTCAAAGAAGCTTTTGATGTTTTCGAGGAAATGGTCTCGAAGGATCGGATTGTGCCTGATCCGCTTACTTACAATGTTTTGATTAATGGATTTTGCCGTGAAGGGAAAGCTGATCGCGCTAGAAATGTTATTGAATTTATGAAAAATAATGGTTGCTGTCCTAATGTATTCAATTACTCAGCCCTGGTGGATGGATTATGTAAAGCGGGGAAACCACAAGATGCAAAAGGGGTTTTGGCTGAGATGAAGAGTTCTGGTTTGAAACCTGATGCAATTACCTACACTTCTTTGATCAATTTCTTCTCTAGGAATGGACAAATTGATGAGGCTATAGATTTGCTTAAAGAAATGAAGGAAAATGAATGTCAGGCTGATACTGTTACATTCAATGTGATACTTGGAGGCTTGTGCAGAAAAGGTAGATATGATGAGGCGTTGGATATGATTGAGAAACTCCCACAGCAAGGTGTGTATTTGAACAAAGGTAGTTACAGGATTGTACTAAATTCCTTAACTCAAAACTGTGAGTTGAGGAAGGCAAAGAAGTTATTAGGGCTAATGCTAAGTAGAGGGTTTGTACCCCATTATGCTACCTCGAACGAATTATTGGTTCGTCTCTGTAAGGAAGGGATGGCTGACGATGCTGCCGTGGCTCTATTTGACTTGGTGGATATGGGGTTCCAGCCACAACTTGATTCCTGGGAACTTTTAATTGACTTAATCTGTAGAGACAGAAAATTATTGTATGTTTTTGAGCTACTTGATGAATTGGTGACAACAAATTCTTGA 1539 0.3847 MKFSAIHCCRHMQPYCVPSASSLPWISPLNFTKPLEPKLDPHPEIVVAETRKKSKYITHDVAINLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLARKLLLYAKRSLVYKPNVCIFNILVKYHCKKGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFDVFEEMVSKDRIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKPQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIDLLKEMKENECQADTVTFNVILGGLCRKGRYDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKAKKLLGLMLSRGFVPHYATSNELLVRLCKEGMADDAAVALFDLVDMGFQPQLDSWELLIDLICRDRKLLYVFELLDELVTTNS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07079 512 Gene3D Tetratricopeptide repeat domain 163 296 IPR011990 GO:0005515
Mepo3g07079 512 Gene3D Tetratricopeptide repeat domain 393 512 IPR011990 GO:0005515
Mepo3g07079 512 Pfam PPR repeat 413 442 IPR002885 -
Mepo3g07079 512 SUPERFAMILY HCP-like 208 409 - -
Mepo3g07079 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 270 304 IPR002885 -
Mepo3g07079 512 PANTHER OS03G0856100 PROTEIN 57 429 - -
Mepo3g07079 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 198 232 IPR002885 -
Mepo3g07079 512 Gene3D Tetratricopeptide repeat domain 297 372 IPR011990 GO:0005515
Mepo3g07079 512 Pfam PPR repeat family 233 283 IPR002885 -
Mepo3g07079 512 Pfam PPR repeat family 339 388 IPR002885 -
Mepo3g07079 512 Gene3D Tetratricopeptide repeat domain 41 162 IPR011990 GO:0005515
Mepo3g07079 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 305 339 IPR002885 -
Mepo3g07079 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 340 374 IPR002885 -
Mepo3g07079 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 410 444 IPR002885 -
Mepo3g07079 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 375 409 IPR002885 -
Mepo3g07079 512 NCBIfam pentatricopeptide repeat 273 306 IPR002885 -
Mepo3g07079 512 NCBIfam pentatricopeptide repeat 309 341 IPR002885 -
Mepo3g07079 512 NCBIfam pentatricopeptide repeat 201 234 IPR002885 -
Mepo3g07079 512 NCBIfam pentatricopeptide repeat 413 444 IPR002885 -
Mepo3g07079 512 NCBIfam pentatricopeptide repeat 236 270 IPR002885 -
Mepo3g07079 512 NCBIfam pentatricopeptide repeat 377 410 IPR002885 -
Mepo3g07079 512 NCBIfam pentatricopeptide repeat 342 375 IPR002885 -
Mepo3g07079 512 Pfam PPR repeat 196 226 IPR002885 -
Mepo3g07079 512 Pfam PPR repeat 300 333 IPR002885 -
Mepo3g07079 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 234 268 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07079 133 508 Glycosyltransferase AT1G05670 28.571 9.20e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07079 - - gmx:100790966 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07079 3 84484141 84488261 Mepo3g07079 3 84484141 84488261 ECH