Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07077 ATGGGTGTCAAAGCATTTCTTGAAGGTGGCATTGCTTCCATCGTCGCCGGAAGCACCACTCACCCACTCGACCTAATCAAAGTCCGAATGCAGCTTCAAGGCGAAAAGAATCTCCCTCTTCGCCCAGCTTACGCTTTTCATCACTCTTCACACTCTCCACCAATCTTTCATCCTAAACCCACCGTTTCTGGACCTATCTCCGTCGGAATCCGCATCGTTCAATCAGAAGGTATCACCGCTCTTTTCTCCGGTGTATCCGCCACCGTCCTCCGTCAAACACTCTATTCTACAACTCGTATGGGTCTCTACGATGTTCTCAAACAAAACTGGACCGATCCAGAAATCGGAACAATGCCGGTAACGAAAAAGATTACAGCAGGTTTAATCGCCGGTGGAATCGGCGCCGCCGTGGGGAATCCTGCTGACGTGGCGATGGTTCGTATGCAAGCTGACGGAAGACTTCCGGTGAATCAGCGACGGGATTACAAAGGCGTGTTTGATGCGATTCGGAGAATGGCGAATCAAGAAGGGATTGGTTCTCTGTGGCGAGGTTCAGCGCTTACGGTGAATCGCGCGATGATCGTAACAGCTTCACAATTAGCTTCGTATGATACATTCAAGGAGATGATTCTGGAGAAAGGGTGGATGAAAGATGGATTTGGGACCCACGTGGTAGCGAGTTTTGCGGCGGGTTTTGTGGCGGCAGTTGCGTCGAATCCCATTGATGTGATAAAGACTAGGGTTATGAGTATGAAGGTGGGATCTGGTGGGGAGGGCGCACCGTATAAAGGTGCACTTGATTGTGCTGTTAAAACTGTTCGTGCTGAAGGGGTTATGGCTCTTTATAAGGGTTTTATTCCTACAATTTCAAGACAGGGTCCTTTTACTGTTGTTCTTTTTGTCACGCTTGAACAACTTAGGAAGCTGCTTAAGGATTTTTGA 942 0.4862 MGVKAFLEGGIASIVAGSTTHPLDLIKVRMQLQGEKNLPLRPAYAFHHSSHSPPIFHPKPTVSGPISVGIRIVQSEGITALFSGVSATVLRQTLYSTTRMGLYDVLKQNWTDPEIGTMPVTKKITAGLIAGGIGAAVGNPADVAMVRMQADGRLPVNQRRDYKGVFDAIRRMANQEGIGSLWRGSALTVNRAMIVTASQLASYDTFKEMILEKGWMKDGFGTHVVASFAAGFVAAVASNPIDVIKTRVMSMKVGSGGEGAPYKGALDCAVKTVRAEGVMALYKGFIPTISRQGPFTVVLFVTLEQLRKLLKDF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07077 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 309 IPR018108 -
Mepo3g07077 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 209 IPR018108 -
Mepo3g07077 313 SUPERFAMILY Mitochondrial carrier 4 306 IPR023395 -
Mepo3g07077 313 PRINTS Mitochondrial carrier protein signature 133 151 IPR002067 GO:0055085
Mepo3g07077 313 PRINTS Mitochondrial carrier protein signature 5 18 IPR002067 GO:0055085
Mepo3g07077 313 PRINTS Mitochondrial carrier protein signature 18 32 IPR002067 GO:0055085
Mepo3g07077 313 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Mepo3g07077 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 109 IPR018108 -
Mepo3g07077 313 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 4 309 - -
Mepo3g07077 313 Pfam Mitochondrial carrier protein 118 212 IPR018108 -
Mepo3g07077 313 Pfam Mitochondrial carrier protein 4 109 IPR018108 -
Mepo3g07077 313 Pfam Mitochondrial carrier protein 219 311 IPR018108 -
Mepo3g07077 313 Gene3D Mitochondrial carrier domain 3 312 IPR023395 -
Mepo3g07077 313 FunFam Mitochondrial uncoupling protein 5 4 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07077 Mepo-Chr3 84468466 84469519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07077 1 312 Miscellaneous Gene Families AT5G09470 59.706 3.03e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07077 K15104 - vvi:100245527 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07077 3 84468466 84469519 Mepo3g07077 3 84468466 84469519 ECH