Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07074 ATGAAAATTAAATTGGTTACAGCCTTAATACTTTGCTCTGCAATTTTCATGAGCATGAGCATGAGCATGAGCAATGCCACTGATCCATGTGCATCTCAACCAGATGACTCCGATCTCAACGTAATTCCCATGTATGGCAAATGCTCGCCATTCAACCCACAAAAAACAGACTCATGGGACAATAGAGTCCTAAACATGGCCTCCAAAGACCCAGCCAGAATGAGCTATCTATCCTCATTAGTAGCCCAAAAGACCGTCTCTTCAGCCCCAATTGCTTCGGGCCAGGCCTTCAACATTGGCAACTACATAGTCCGTGTCAAAATCGGAACACCCGGTCAACTCCTCTTCATGGTCCTTGACACAAGTACCGACGAGGCTTTTGTCCCTACCTCTGGCTGCACTGGTTGCTCTGCAACAACTTTCTCACCCAATGCCTCCACTAGTTATGTGCCATTGGAGTGTTCCGTTCCACAATGTAGTCAGGTCCGTGGACTCTCATGTCCAGCCACGGGCTCTGGCGCATGTTCCTTCAACAAATCTTACGCAGGTTCAACTTACTCTGCCACACTTGTTCAAGATTCACTTAGATTAGCTACGGATGTTATCCCTAGCTACTCTTTTGGATCCATCAATGCTATCTCTGGTTCTTCAATTCCAGCCCAAGGACTTTTGGGCTTGGGCCGTGGCCCATTATCTTTATTATCCCAAACCGGGTCACTTTACTCGGGTGTATTCTCCTACTGCCTTCCAAGTTTCAAATCTTACTATTTTTCCGGGTCACTTAAACTCGGACCCGTGGGTCAGGCCAAAAGTATTCGAACCACACCACTTCTTCGCAATCCTCGCCGTCCATCTCTTTATTTTGTCAATTTAACCGGAATTACCGTGGGAAAAGTAAATGTACCTTTCCCCAAAGAACTTTTAGCGTTCGACGTGAATACCGGATCTGGAACCATAATTGATTCGGGTACGGTTATTACCCGTTTTGTGGAACCCGTTTACAACGCAGTTAGGGATGAGTTTAGGAAACAAGTAACCGGACCTTTTTCGAGCTTAGGAGCATTCGACACATGTTTTGTGAAGAACTATGAAACCTTGGCACCAGCTATTACATTGCATTTCACAGATTTGGATCTAAAATTACCACTGGAGAATAGTTTGATCCATAGCAGTTCAGGATCGTTGGCTTGTCTTGCAATGGCGTCTGCACCAAAGAATGTGAACTACACTGTGTTGAATGTGATTGCTAATTATCAACAACAGAATTTGAGGGTTTTGTTTGATACCGTGAATAATAAGGTTGGTATCGCCCGTGAGCTTTGTAACTAG 1329 0.4492 MKIKLVTALILCSAIFMSMSMSMSNATDPCASQPDDSDLNVIPMYGKCSPFNPQKTDSWDNRVLNMASKDPARMSYLSSLVAQKTVSSAPIASGQAFNIGNYIVRVKIGTPGQLLFMVLDTSTDEAFVPTSGCTGCSATTFSPNASTSYVPLECSVPQCSQVRGLSCPATGSGACSFNKSYAGSTYSATLVQDSLRLATDVIPSYSFGSINAISGSSIPAQGLLGLGRGPLSLLSQTGSLYSGVFSYCLPSFKSYYFSGSLKLGPVGQAKSIRTTPLLRNPRRPSLYFVNLTGITVGKVNVPFPKELLAFDVNTGSGTIIDSGTVITRFVEPVYNAVRDEFRKQVTGPFSSLGAFDTCFVKNYETLAPAITLHFTDLDLKLPLENSLIHSSSGSLACLAMASAPKNVNYTVLNVIANYQQQNLRVLFDTVNNKVGIARELCN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07074 442 Pfam Xylanase inhibitor C-terminal 287 437 IPR032799 -
Mepo3g07074 442 SUPERFAMILY Acid proteases 95 441 IPR021109 -
Mepo3g07074 442 Gene3D Acid Proteases 77 264 IPR021109 -
Mepo3g07074 442 PANTHER ASPARTYL PROTEASES 11 435 IPR001461 GO:0004190|GO:0006508
Mepo3g07074 442 Gene3D Acid Proteases 265 442 IPR021109 -
Mepo3g07074 442 ProSiteProfiles Peptidase family A1 domain profile. 102 437 IPR033121 -
Mepo3g07074 442 FunFam Aspartyl protease AED3 265 442 - -
Mepo3g07074 442 FunFam aspartyl protease AED3 81 264 - -
Mepo3g07074 442 Pfam Xylanase inhibitor N-terminal 102 264 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07074 Mepo-Chr3 84440472 84442180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07074 92 442 Miscellaneous Gene Families AT1G77480 26.923 1.34e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07074 - - gmx:100816307 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07074 3 84440472 84442180 Mepo3g07074 3 84440472 84442180 ECH