Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07073 ATGCGTGTCACCGCGGATCTAGGGTTTACGAGCCTGGTCCTTGTGGTGGTTTGTGTGGTGGTTCCGGTGCTCGGATTTGTAATTCGTCGGAAATGGCAAATTGCGGTGGCTAGAAATGAAGAGATCAAGAGGCTTTTGATATTGGCTGCTGAGGAAACTGCCAGGGTTGAGAGAGAGACGTTGTATTCCTCCGGTGCGGTGGTTTCCGCCACTAACAATTATCAATGTGCTCTCTGCTATTTCCCTGCCACTGCACGCTGCGCTAAGTGCAAATCTGTTCGATACTGCTCCACTGATTGCCAAACCGTTCATTGGCGTCAGGGTCATAAATTTGATTGTCGTCCTCCTAGCAAAACTCATCGGAGCGATAGCGTTATAAGTGATATTGTAAAGAGGGAATTGGAGCATGATTTCTCTGGAAACCACGAGGAGAAATCTGAAAGCAGAGGCGCAGAGTGTAAAATACCATCTGAAAATGCCAGCTTTTCTCCTGAGGTTTCATTTAGAAAGGATGATAATATTCTTGCCGGGTTCCTTGCAGAAGAAAATTTAGCAGATTCTAATTCTGAATTTTCCAGTAACTCATTTTCTGGATTTTCGGCTTCCACAAATTCTGGCGATTCATCTGATGATTCGTCTGTCTGTGAGAGTATCATCTCTAATGAGCATGACAGATCAGAGGGACATGTTTCTGTTGTTCATACCCTTGACCTTACCGATAAAACCACAATTGATAGTAAGGTGGATGCAGCAATGTCTTCTTCACCAAAGTTTGCTAGTTTGCTTGATTCAGTTGATGGTTCTTCTACAGTTCATAAATTAAATCATGTTGCTCCTGGTTCTAGTAATGAAGAGAGGAAGCTTGCATCAAATGGTGCCTTAGGCTCAAGCATAGGGAAGGGGGCAAAAATTGAGCCTTCTGGATTTTGGGATAAAGCTCTTGATTCGAGAGGGATTAAAGATGACACTTATCCATCCCATTCTGATGAATCAGCTGGTGAAAAGACTGATTCTGGATTGTCATTTCGCTTTCAATTCAGTACCACACCTCCTTTGCATATACAAGACACCGAGGCTAACGAATCTTCGAATTATGATGCTCTTCCAAACTCTGTTGGGAAGAATATGCCACACCCAGGACCAGCATCATCTGAGAATGTAATTCATTCTTCAAAGGCAAGGAACCTCTCATTCATCAACGGCAAAGATGCCAATATTATAAGCAATACTCCCGGTGGTTCTGGATATGATCAATTGGAATCTAAAGACAGGTCGGAGCCGCCTCTATATTCTTTTTCCTCCCAATCCTCTAGTATTGGCAAAGATCCAGGTTCTGCAGATGCTATGAGCATACATAACTTGCAATCATCTAGCTCTGTGGCATCAAATCATGTTGTGGACAACCATGGCTGCACCTTGAAGTCTACCGATATTAGATGCCAGACACGCGAGCTTGCTGATTCTAAATTAGCTTCTACAACTGAAGTAAATTCACATCCCGGTACAAAACATAGGAAGAATGAATATGGGACTGTCACTTCTCACGTTGCTAGCTATTCTGGAAATTCTAAGAGTGGCTTGAAAACATCTGTTTTAAAAGTTGTTGATCAGTTTAGAGGATCAAATTTGTCAAAGCACGTTCCTTCAGCAGCTGGGAGTGATATCGCTGGAAAATACAATGACAAGGTTTTTTTTCCATATGAAACATTTGTCAAGCTTTATAACTCTAACAAGGTGGAGTTGCACCCATTCGGTCTTATAAATATTGGAAACAGTTGTTATGCTAATGCCGTACTTCAGTGCCTAGCATTTACACCACCCTTATCTGCTTATTTGGTTCAAGGAATACACTCTAAATCATGTACAAATAAAACATGGTGTTTCATATGTGAATTTGAAAGACTGATTTTGAAGTCAAAGGATACAAAATCTCCACTATCTCCAACGGGCATACTTTCTCAACTACAGAGTATTGGGAGTCAGCTTGGAAATGGCAAAGAAGAAGATGCTCATGAATTTCTAAGGCATGCTATTGACACAATGCAATCTGTATGCCTTACGGAAGCTGGGATTAATGCATCGGGTTCATTGGAAGAAGACACTACTTTAATGGGTCAAACATTTGGAGGATACCTTCGATCGAAGATAAAATGCATGAAATGTGGTGGGAAGTCCGAGCGTCAGGAAAGGATGATGGATCTAACTGTTGAGATAGAAGGGGAGATATCAACACTTGCGGAGGCCCTTCGAAGGTTTACAAGCACTGAGACTTTGGATGGAGAAAACAAGTACCACTGTGTCAGATGTAAATCCTATCAGAAGGCCAAGAAGAAGCTGACAGTTTCAGAGGCACCAAATATTCTTACAGTTGCATTGAAGAGATTTCAGTCTGGAAAATTCGGGAAGCTCAACAAGCCTGTTCAATTTCCGGAAATACTTGACCTGGCTCCTTTCGTGAGTGGGATCAGTGATAAGACACCCATTTACAGATTGTACGGAGTGGTTGTTCATTTAGATGTTATGAATGCTTCTTTTTCGGGTCACTATGTGTGCTACTTGAAGAATATTCAAAATAAATGGTTCAAGGTTGACGACAGTGTGGTAACAGCAGTTGAATTAGAGAGAGTCTTGACAAAAGGAGCATATATGCTTTTTTATGCAAGGTGCTCTCCAAGGGCCCCAAAATTGATTAGAAACCGGATACTATCCCAAGATTCAAAAAGTAAGGTCAACGGAAAGTCTACAAAAGCAAGATATACATCATCAGATTCTGGTGCGGCTGAACCCATCAGTAGTTCAGTATCTCCTGATGGCTCACCCACCTTGGACTCTTTCTATTCAAGGTTTCACCACCTAAAAAAGATTTTAGAGGAAGACTCATCAAGTGATAGTTCATCCCTTTTCAGCAGTAATTCCGATGAAGGTTCTTGCAGTACTGATAGTACCCGTGATTCAACTAGCATGGATGACTTCTCCGATTATATTTTTGGTGATTCAGGGCGCGGATGGAGTAGCACTTGGAGGAATTCTGATTCTGACACATCTTCCTCCTCATCTCCCTTGAATTGTAGACAGTCGCCCCTATCTGATATGGACAAGTATGATTCAGTTTCTCCAGAGGCCACTAATTTTCGAATTCCCACCGATTCAAGTGCGAAGACAGATAGGGATGATGTTATTTCTGATTTGCATTCTGACACAATTTTACAGCATAGAAAGTTGGATAGTAGTAGCATTAGCAGCAATAGTAGTAGTAAGGACGCTGACTCATTTCTGAAACTAGGATCTAACCATTCAAATGATAAGAACTCTGTTGTATCGTGTAGAAAATCAAGGAAAAGAACGGAATGA 3351 0.4157 MRVTADLGFTSLVLVVVCVVVPVLGFVIRRKWQIAVARNEEIKRLLILAAEETARVERETLYSSGAVVSATNNYQCALCYFPATARCAKCKSVRYCSTDCQTVHWRQGHKFDCRPPSKTHRSDSVISDIVKRELEHDFSGNHEEKSESRGAECKIPSENASFSPEVSFRKDDNILAGFLAEENLADSNSEFSSNSFSGFSASTNSGDSSDDSSVCESIISNEHDRSEGHVSVVHTLDLTDKTTIDSKVDAAMSSSPKFASLLDSVDGSSTVHKLNHVAPGSSNEERKLASNGALGSSIGKGAKIEPSGFWDKALDSRGIKDDTYPSHSDESAGEKTDSGLSFRFQFSTTPPLHIQDTEANESSNYDALPNSVGKNMPHPGPASSENVIHSSKARNLSFINGKDANIISNTPGGSGYDQLESKDRSEPPLYSFSSQSSSIGKDPGSADAMSIHNLQSSSSVASNHVVDNHGCTLKSTDIRCQTRELADSKLASTTEVNSHPGTKHRKNEYGTVTSHVASYSGNSKSGLKTSVLKVVDQFRGSNLSKHVPSAAGSDIAGKYNDKVFFPYETFVKLYNSNKVELHPFGLINIGNSCYANAVLQCLAFTPPLSAYLVQGIHSKSCTNKTWCFICEFERLILKSKDTKSPLSPTGILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCLTEAGINASGSLEEDTTLMGQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTETLDGENKYHCVRCKSYQKAKKKLTVSEAPNILTVALKRFQSGKFGKLNKPVQFPEILDLAPFVSGISDKTPIYRLYGVVVHLDVMNASFSGHYVCYLKNIQNKWFKVDDSVVTAVELERVLTKGAYMLFYARCSPRAPKLIRNRILSQDSKSKVNGKSTKARYTSSDSGAAEPISSSVSPDGSPTLDSFYSRFHHLKKILEEDSSSDSSSLFSSNSDEGSCSTDSTRDSTSMDDFSDYIFGDSGRGWSSTWRNSDSDTSSSSSPLNCRQSPLSDMDKYDSVSPEATNFRIPTDSSAKTDRDDVISDLHSDTILQHRKLDSSSISSNSSSKDADSFLKLGSNHSNDKNSVVSCRKSRKRTE 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07073 1116 SUPERFAMILY Cysteine proteinases 580 891 IPR038765 -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 352 386 - -
Mepo3g07073 1116 FunFam Ubiquitin carboxyl-terminal hydrolase 15 67 117 - -
Mepo3g07073 1116 FunFam Ubiquitin carboxyl-terminal hydrolase 15 578 897 - -
Mepo3g07073 1116 Pfam Ubiquitin carboxyl-terminal hydrolase 584 886 IPR001394 GO:0004843|GO:0016579
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 1073 1104 - -
Mepo3g07073 1116 Gene3D Cysteine proteinases 576 900 - -
Mepo3g07073 1116 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 584 889 IPR028889 -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 907 938 - -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 315 339 - -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 1004 1058 - -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 403 449 - -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 315 336 - -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 961 989 - -
Mepo3g07073 1116 ProSiteProfiles Zinc finger MYND-type profile. 76 113 IPR002893 -
Mepo3g07073 1116 Gene3D - 62 118 - -
Mepo3g07073 1116 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 317 892 - -
Mepo3g07073 1116 SUPERFAMILY HIT/MYND zinc finger-like 73 116 - -
Mepo3g07073 1116 ProSitePatterns Zinc finger MYND-type signature. 76 113 IPR002893 -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 1004 1032 - -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 352 370 - -
Mepo3g07073 1116 Pfam MYND finger 76 113 IPR002893 -
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 1073 1116 - -
Mepo3g07073 1116 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 585 600 IPR018200 GO:0004843|GO:0006511
Mepo3g07073 1116 MobiDBLite consensus disorder prediction 427 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07073 Mepo-Chr3 84413909 84420817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07073 562 933 Miscellaneous Gene Families AT4G31670 46.933 5.50e-118 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07073 K11855 - gmx:100793079 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07073 3 84413909 84420817 Mepo3g07073 3 84413909 84420817 ECH