Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07050 ATGTCCACCACTAACGAAGATTTACAAGTGGTAGGTGTTTCAAATTGTTATGTGTTCAAGAGCCAATTGCAAGAGTATGCACAGAAAGCAGGACTTGGCACACCCGTGTATGAAACTACCAAGGAAGGGCCTTCCCATGAACCTTCTTTCAGGTCAACAGTGATTATGAATGATGTTCGGTATGATTCTTTGACTGGATTTTTTAACCGTAAAGCAGCAGAGCAGTCAGCTGCAGAAGTTGCTTTGATGGAGTTGGCCAAAACTGGTGAAGTTAATCAGTCTATTACTCAACCTGTTCATGAAACTGGATTGTGCAAGAATTTACTTCAGGAATATGCACAGAAGATGAATTATGCAATGCCATTGTATCAGAGCAAAAAGGATGACACACCACCAGGTAGGGCACCATTATATTCGTGTACGGTTGATATTGGAGGGATGCTCTATATTGGAGGAACAGCAAAAACAAAGAGGGAAGCTGAGATAAAAGCCGCGAGAACTGCTTTATTAGCTATCCAGACAAATGCATCTCAGGCTTCTGAAAACCAGTTTGGCCATTTGACTGTCATTCCATCCCGAAAAAGGGCAACGGAATCTATTGCTGATGAGGCTTCGAAAGCTCCGAAGTCTAAGAAATCACGCTTTAAAGGGAAATATTCCAAGAAGAAACCGCATAGAAATAAGAAGCGCCGTATTATCACTGACAATGCTGGTGATGGAGCAAAGATCAATAATGGGGCAGAATCACTGGCAAGTGCTAATGATGAATCTGGCCTCCAGGAAATCAAATCTGAAGCAGCACTCCCTTCAGAAGTCATGAAAAATTCTGAGAAGGGAGTATCATCTAATCATCATGAGAAAGAGACATTAGCTGGCCTCCAGGAAATTAAATCTGAAGCAGCATTCCCTTCGGAAGCCATGCAGTATTATGATAATGGAGCTTCAACTAATCGTCATGAGAAAGAGACATTAGCTGGCCTCCAGGAAGTCAAATCTGAAGCAGCATTTCCTTCAGAAGCCATGAAGAATTCTGAGAACGGAGCATCAACTAATTATCATGAGAAAGAGACATTTGCTGGCCTCCAGGAAATTAAATCTGAAGCAGCATTCCCTTCGGAAGTCATGCAGTATTATGATAATGGAGTGTCAACTAATCGTCATGAGAAAGAGACATTAGCTAGCCTCCAGGAAGTCAAATCTGAAGCAGCATTTCCTTCAGAAGCCATGAAGAATTCTGAGAACGGAGCATCAACTAATTATCTTGAGAAAGAGACATTAGCTGGCCTCCAGGAATTCAAATCTGAAGCAGCATTCCCTCCAGATGAAGCCATGCAGAATTCTGAGAACGGAGTGTCAACTAATCATCATGAGAAAGAGATATTAGCTGCCATAAAGGAAGTCAAATCGGAAGCAGCATTCCCTTCAGATGAAGCCATGCAGAATTCTGAGAACGGAGCATCAACTAATTATCATGAGAAAGAGACATTAGCTGCCGTCCAGGAAGTCAAATCTGAAGCAGCATTCCCTTCAGATGAAGCCATGCAGAATTCTGAGAACGGGGTGTCAACTAATCATCATGAGAAAGAGACGTTAGCTACCATCCAGGAAATCAAATCTGAAGCAGCATTCCCTTCAGATGAAGCCATGATGAATTCTGAGAACGGAGTCTCAACTAATCATCATGAGAAAGAGACATTAGCTGCCATCCAGGAAATCAAATCTGAAGCAGCATTCCCTTCAGAAGCCATGACAAATTCTGAGAACCGAGTCTCAACTAATCATCATGAGAAAGAGACATTAGCAGGCATCCAAGAAATCAAATCTGAAGCAGCATTCCTTTCAGAAGTCATGAAGAAGAATTCTGGGAGTGATATATCAACTAATCTTCATGAGAAAGAGATGTACCAGTCATTTGTTTTGAATAATCAAGAGAATTTTGAAAGTGGGAAGTTAACAGAATTGCAATCCAAAGAGATCAATATTGGGAATGTTGTCACAGAAGTGTCATTTGCTCCCGAAGGATACATACTGGCGATGAGCGTGGAGATGAACAAACAGAATTGCAATGGAGATATGGTCTCTGGCGAATGA 2091 0.417 MSTTNEDLQVVGVSNCYVFKSQLQEYAQKAGLGTPVYETTKEGPSHEPSFRSTVIMNDVRYDSLTGFFNRKAAEQSAAEVALMELAKTGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPLYQSKKDDTPPGRAPLYSCTVDIGGMLYIGGTAKTKREAEIKAARTALLAIQTNASQASENQFGHLTVIPSRKRATESIADEASKAPKSKKSRFKGKYSKKKPHRNKKRRIITDNAGDGAKINNGAESLASANDESGLQEIKSEAALPSEVMKNSEKGVSSNHHEKETLAGLQEIKSEAAFPSEAMQYYDNGASTNRHEKETLAGLQEVKSEAAFPSEAMKNSENGASTNYHEKETFAGLQEIKSEAAFPSEVMQYYDNGVSTNRHEKETLASLQEVKSEAAFPSEAMKNSENGASTNYLEKETLAGLQEFKSEAAFPPDEAMQNSENGVSTNHHEKEILAAIKEVKSEAAFPSDEAMQNSENGASTNYHEKETLAAVQEVKSEAAFPSDEAMQNSENGVSTNHHEKETLATIQEIKSEAAFPSDEAMMNSENGVSTNHHEKETLAAIQEIKSEAAFPSEAMTNSENRVSTNHHEKETLAGIQEIKSEAAFLSEVMKKNSGSDISTNLHEKEMYQSFVLNNQENFESGKLTELQSKEINIGNVVTEVSFAPEGYILAMSVEMNKQNCNGDMVSGE 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07050 696 Gene3D - 19 100 - -
Mepo3g07050 696 MobiDBLite consensus disorder prediction 265 286 - -
Mepo3g07050 696 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 18 87 IPR014720 -
Mepo3g07050 696 Pfam Double-stranded RNA binding motif 106 170 IPR014720 -
Mepo3g07050 696 Pfam Double-stranded RNA binding motif 20 84 IPR014720 -
Mepo3g07050 696 CDD DSRM_AtDRB-like_rpt1 18 86 IPR044450 GO:0003725
Mepo3g07050 696 SUPERFAMILY dsRNA-binding domain-like 106 173 - -
Mepo3g07050 696 Gene3D - 101 174 - -
Mepo3g07050 696 MobiDBLite consensus disorder prediction 198 245 - -
Mepo3g07050 696 FunFam double-stranded RNA-binding protein 1 16 92 - -
Mepo3g07050 696 SUPERFAMILY dsRNA-binding domain-like 19 86 - -
Mepo3g07050 696 PANTHER RIBONUCLEASE III 16 230 IPR011907 GO:0003723|GO:0004525|GO:0006364
Mepo3g07050 696 SMART DRBM_3 105 173 IPR014720 -
Mepo3g07050 696 SMART DRBM_3 19 86 IPR014720 -
Mepo3g07050 696 MobiDBLite consensus disorder prediction 211 230 - -
Mepo3g07050 696 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 104 174 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07050 Mepo-Chr3 84133943 84138147 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07050 - - tpra:123915838 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07050 3 84133943 84138147 Mepo3g07050 3 84133943 84138147 ECH