Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07049 ATGCACGGTCGACCTCGCAAACCGTTGAAGGAAGAAGATGAATCAGTTTTATCAGCCAAAGCTGAAAAGCTTCTTTCACTTCAATCTCAATTCCTCGCCAATCACCAAAATCGCATTTATACCAAAGAAGCTTTAGATTTGAGCGCGAAGCTTCTAGAAATTAATCCAGAATGCTACACAGCTTGGAATTACAGGAAACTCGCCGTTCAACACAATCTCTCTGAATCCAATTTCGATTCCGATGCATCTCTCTTCGATCAGGAGCTCAAAGTGGCGGAGAATGCATTGAAAAAGAATTTCAAGTCGTATGGTGCATGGCATCATAGAAAATGGGTGCTTAGCAAGGGGCATTCATCCATTGATAATGAATTGCGCCTTCTGAATGATTTTCAGAAGGCTGATGCTAGGAATTTTCACGCTTGGAATTACCGAAGATTTGTTACTGCACTAATGAAAATATCCGATGAGGATGAGTTGAAATACACAGAGAAAGTGATAGGGGTTAATTTTAGTAATTACTCTGCGTGGCATAATAGGAGCGTGCTTTTATCTACTTTATTTAAAAGAAAGGCCGAAGGATTTTCCCATAAAGAAAAGGTTTTGCAAGAGGAGTATAATCATGTCCACAGTGCTATTTTTACTGATTCAGATGATCAGAGTGGTTGGTTTTATCATCTTTGGCTTATTGATCAAACCGTGAAAAATGATGCTCCTCTACTCATTTCATCTTGGCCATCTCATGGAGCTAATATAACACTGAATGGAAACAACTACCTACATGGTTCTGGTTTGTCTCTGTTGAATAGTACATTATCAGACACTAAAACACTTCCAGTAATTCTATATTTCAATCAAGCTGTTGAAGGTGTCAACTCGTCCACAGTAGTTGTTAAATCTGAGCTCTTGAAAGAAGATCTTGTTTGGAAACCACTTTCTACAAATAACTCGAGTATTGCTCAAGTTTGGGTTGTGTACCTAAACATGGGAAATATGGAGCTCCAACTATCAAAAACCTATTCTATAGAGATCACCGTTGGACATTCCATGGGTATTTTATCTTCAAGTGGATATCATTATGGGGCTCCTTCCCAAATTACTTTTGAAGTGTGTGTACAGACTGCTTATACAGAACCTGTTGATGGGCAACGTGGAAAGTTGACTTCATGGAAGGACAATGATTTCAGAAAAATTGATCATTTTGAAGAATCAAATCCCGCTGCATCTGCTGATCACCATATTCCAACAACTTCCAATTGGTGCATGGAGGCAATTGATGAAGAAATAACTAATTTTCAAGATTTGTCAGACTGTAAAATTAGAAAGCTTACACTTGCAAGACTTTTGACTACTCTTGATTTGTTATCACCCCAACATGATAAAAGAAAAAATCATAACGAAGAAGTTCTCAAGCTTTACACCGAGCTGATGAAGTTGGATCCAACACATTCTCTATACTACAAGGATGAGCACAGTCTGGTATTACTTCAACAGATAACTTCATCAAGAGAGTCTTTACTACCATATTGCCACTACTATAAAGACGCATCAGAAAGAAATACTAGTTATGTGTGTCTACGGTTACAAAATCTATCGCTGTCACGGATGGGGTCCTTTGAGAATTTACTGTGGGTGCAAATGCTAGACCTTAGCCACAATGAACTTCGATCAATTGAAGGGTTGGAGGCCATGCAACTTCTATCTTGTTTAAATCTGAGTCATAATAAACTTGGTAGTTTTACTGCTTTGGGGCCTCTCAGATTGCTAGAGTCACTTAAAGTGTTGAATATCTCTTGCAATGAGCTAGGCTCTCACCCAATTGACACGAGACGATACCTATGCTCTTCGCCATTAGCACATACTGAAGTATTTGCTTGGGACCGTTTTGAAATCCTTGGTGGCAGTTATAGTGCCACAAAGTTTTGGGAAGCTTTCTTGATATTTGAAAGCTTGAACTTGACTGATTTGAACATATCAGGAAATGCAGTTGCTGATGAGAACTTCACGTCATTTATTGTCAAAGTTTTGCCTACTCTGAAGTGCCTAAATGATGAAAAGTTATAA 2061 0.3857 MHGRPRKPLKEEDESVLSAKAEKLLSLQSQFLANHQNRIYTKEALDLSAKLLEINPECYTAWNYRKLAVQHNLSESNFDSDASLFDQELKVAENALKKNFKSYGAWHHRKWVLSKGHSSIDNELRLLNDFQKADARNFHAWNYRRFVTALMKISDEDELKYTEKVIGVNFSNYSAWHNRSVLLSTLFKRKAEGFSHKEKVLQEEYNHVHSAIFTDSDDQSGWFYHLWLIDQTVKNDAPLLISSWPSHGANITLNGNNYLHGSGLSLLNSTLSDTKTLPVILYFNQAVEGVNSSTVVVKSELLKEDLVWKPLSTNNSSIAQVWVVYLNMGNMELQLSKTYSIEITVGHSMGILSSSGYHYGAPSQITFEVCVQTAYTEPVDGQRGKLTSWKDNDFRKIDHFEESNPAASADHHIPTTSNWCMEAIDEEITNFQDLSDCKIRKLTLARLLTTLDLLSPQHDKRKNHNEEVLKLYTELMKLDPTHSLYYKDEHSLVLLQQITSSRESLLPYCHYYKDASERNTSYVCLRLQNLSLSRMGSFENLLWVQMLDLSHNELRSIEGLEAMQLLSCLNLSHNKLGSFTALGPLRLLESLKVLNISCNELGSHPIDTRRYLCSSPLAHTEVFAWDRFEILGGSYSATKFWEAFLIFESLNLTDLNISGNAVADENFTSFIVKVLPTLKCLNDEKL 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07049 686 FunFam Geranylgeranyl transferase type-2 subunit alpha 1 238 - -
Mepo3g07049 686 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 40 74 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 200 234 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 ProSiteProfiles Leucine-rich repeat profile. 543 564 IPR001611 GO:0005515
Mepo3g07049 686 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 84 118 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 ProSiteProfiles Leucine-rich repeat profile. 565 586 IPR001611 GO:0005515
Mepo3g07049 686 Pfam Protein prenyltransferase alpha subunit repeat 42 71 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 Pfam Protein prenyltransferase alpha subunit repeat 121 148 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 Pfam Protein prenyltransferase alpha subunit repeat 201 231 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 Pfam Protein prenyltransferase alpha subunit repeat 156 185 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 Pfam Protein prenyltransferase alpha subunit repeat 86 114 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 Gene3D Protein prenylyltransferase 1 246 - -
Mepo3g07049 686 FunFam Rab geranylgeranyl transferase like protein 502 686 - -
Mepo3g07049 686 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 497 - -
Mepo3g07049 686 SUPERFAMILY L domain-like 518 684 - -
Mepo3g07049 686 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 154 188 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 Gene3D Ribonuclease Inhibitor 512 686 IPR032675 -
Mepo3g07049 686 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 119 153 IPR002088 GO:0008318|GO:0018342
Mepo3g07049 686 SUPERFAMILY Protein prenylyltransferase 17 489 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07049 K14050 - gmx:100807900 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07049 3 84126650 84131022 Mepo3g07049 3 84126650 84131022 ECH