Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07013 ATGGCATTCTCTAATGCTTTGATTTTAGGCTTCTTTTTAACGATCAATATGGCACTGCCAACTCTTGCAACAATCCACACCGTTGGAGATAAATCAGGTTGGGCAATTGGTTCTGATTATAACACATGGGCTAGTGACAAAACATTTGCAGTTGGTGACAGTCTCGTGTTCAACTATGGAGCTGGGCACACAGTGGATGAAGTTAAAGAAAGTGACTATAAATCATGCACGACTGGAAATTCAATTAGTACAGACAGCACTGGTGCCACAACCATCCTCCTCAAGAAAGCAGGAACACATTACTTCATATGTGCTGTTCCTGGGCATTGCACAGGTGGCATGAAACTTTCTGTTAAAGTTAAAGCTTCTTCTAGTGCTGCTTCTGTTGCTCCTTCTGCAACACCTTCACCATCTGGGAAAGGTTCACCTTCCGATAGCACCCCTGCCACAACCACCACACCCTCCACCACCACTACTCCTTCCACACAAAGTGCATCTTCAGCTACTAGTATCTCACCAATTGTTGCTTTATTTTTCACTGTTTCATGGATTTTGATCGGTTATATAATGGTGTGA 576 0.4323 MAFSNALILGFFLTINMALPTLATIHTVGDKSGWAIGSDYNTWASDKTFAVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSISTDSTGATTILLKKAGTHYFICAVPGHCTGGMKLSVKVKASSSAASVAPSATPSPSGKGSPSDSTPATTTTPSTTTTPSTQSASSATSISPIVALFFTVSWILIGYIMV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07013 191 CDD Phytocyanin 24 116 - -
Mepo3g07013 191 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Mepo3g07013 191 PANTHER BLUE COPPER PROTEIN 23 133 IPR039391 GO:0009055
Mepo3g07013 191 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Mepo3g07013 191 FunFam Blue copper 22 126 - -
Mepo3g07013 191 Gene3D - 22 127 IPR008972 -
Mepo3g07013 191 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Mepo3g07013 191 Pfam Plastocyanin-like domain 35 114 IPR003245 GO:0009055
Mepo3g07013 191 MobiDBLite consensus disorder prediction 129 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07013 Mepo-Chr3 83746071 83747109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07013 34 125 Miscellaneous Gene Families AT1G22480 63.043 1.67e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07013 - - gmx:100306522 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07013 3 83746071 83747109 Mepo3g07013 3 83746071 83747109 ECH