Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07010 ATGCTTCACCACCCATTACTCTGCGCTTCAAGAACCGCCACTCAATCTTCACTCTTCGCATCCGTTTTCTCCGGCACCGGCAACGTTCCTGGTCGCAATTCACTCGCCGGGAATTTTGGGTTGAAGTTTAGTAAGCAAATGTCTGGAAGCAAATTGAATTATAGTCAGACAAGAGAAGGTTTCAAGCTTAGGAAAACTAATGCTAATGCTAATGCTAATGCTTATGGTCGTGCTCAAGAAGAGGTTCTTAAGGAAGAAGCCATCGAAGTGGTGGAGAACAGACCATCATGGGAGACTTCTCCAGGCCAAGCTTTTCCGTTGGGTGTATCACAAGTCGACAATGGGATCAATTTTGCTATATTTTCACAGCATTCAACTGCTGTCACACTTTGTTTGGTCCTTCCTGAAAGGGGAAGCATTGACACACTGGATGGTGGTATGATAGAACTGGCTTTGGATCCTCATTCAAACAAAACAGGGGATATCTGGCACATATGTATTGAGGATCTTCCTAGGAGCAATGTTCTGTACGGATACCAGATTGATGGACCTCAAGACTGGGGTAAGGGGCATCGATTTGACAGAAGCATTGTGCTTGTTGATCCTTATGCAAAACTAATTGAAGGTCGAAGATATTTTGGGGATATTAGCAGGAAATTGTCTAAGTTTCTAGGCACATATGATTTTGACAGCCTGCCTTTTGACTGGGGAGAAAATTACAACCTTCCAAATATTGCCGAGAAAGATCTTGTTATATATGAGATGAATGTCCGTGCATTTACAATGGATGAATCTAGTGAGTTGGATAACAACATTCGTGGAAGCTATCTTGGTGTAATTGAGAAGATCCCACACCTTTTAGAGCTTGGTATCAATGCAGTGGAGTTGCTGCCAATCTTTGAGTTTGATGAGATGGAATTGCAGAGACGTCCAAATCCCAGAGATCACATGATTAATACGTGGGGTTATTCAACAATAAATTTCTTTGCTCCTATGAGTCGCTATGCTAGTGCTGGTGGAGGACCAGCTAATGCTTCCCAAGAGTTGAAGCAAATGGTTAAAGCCTTACATTCTGCTGGCATAGAGGTTATTTTGGATGTTGTCTACAATCATACGAATGAGGCTGATGATCCTAATCCTTACACTACTTCATTTCGTGGCATAGATAATAAGGTTTATTACATGCTGGACGACAAAGGACAATTGCTGAATTTCTCTGGCTGTGGAAATACATTGAATTGTAACCATCCTGTGGTCATGGATCTAATTCTTGACAGCCTAAGACATTGGGTCACTGAGTATCATGTGGACGGATTTCGATTTGATCTCGCAAGTATACTGTGTCGAGGAACTGATGGTGCCCCCCTCAATGCTCCTCCCCTCATCAGGGCAATTGCTAAAGATGCTGTCTTGTCAAGATGTAAAATTATTGCAGAGCCTTGGGACTGTGGAGGTCTATATCTTGTTGGAAGTTTTCCGAACTGGGACCGGTGGGCTGAATGGAATGGGAAATATCGTGATGATATACGGAAATTTATCAAGGGTGATTCTGGTATGAAGGGGAGCTTTGCAACTCGTGTTTCTGGATCTTCTGATCTCTACAGAGTGAACAAGCGTAGACCATATCATGGTATTAATTTTGTTATTGCGCACGATGGATTTAGCTTGCGTGATCTTGTTTCATACAACTTCAAGCACAACGAAGCTAACGGGGAAGGTGGAAATGATGGATGCAATGATAACTTTAGTTGGAACTGTGGTTTTGAAGGTGAAACTGATGATGCTAGTATAAGAGCTCTGCGGTCGAGGCAAATGAAGAACTTTCATCTAGCATTAATGATTTCTCAGGGAACACCGATGATGCTAATGGGGGATGAATATGGCCATACTCGCTACGGAAATAACAATAGCTATGGGCATGATTCTGCCATTAATTTTTTCTTGTGGGATCAGTTGGATGCAAGGAAGGGCGATCACTTTAGGTTTTTCTCCAATGCGATAAAGTACCGGCATGCACATAAAACATTGAGTCATGAAAATTTTCTCAGCGAGAATGAAATAACATGGCATGAAGACAATTGGGACAATTACGAAAGCAAATTTCTTGCATTTACGCTTCATGACAAAAGTGGAGGAGATATCTATTTAGCTTTTAATGCTCATGACTACTTTTTGAAAGCTCTGCTGCCCACGCCCCCAACAAAAAGAAAGTGGTTTCGTGTGGTGGACACTAATCTTCAATCTCCTGATGACATCGTCCTCGATGGTGTCCCAGGCATAGGAGAAACGTACAGTATAGCTCCATACTCCTCCATTCTTCTGGAGGCCAAGTTTTGA 2337 0.4236 MLHHPLLCASRTATQSSLFASVFSGTGNVPGRNSLAGNFGLKFSKQMSGSKLNYSQTREGFKLRKTNANANANAYGRAQEEVLKEEAIEVVENRPSWETSPGQAFPLGVSQVDNGINFAIFSQHSTAVTLCLVLPERGSIDTLDGGMIELALDPHSNKTGDIWHICIEDLPRSNVLYGYQIDGPQDWGKGHRFDRSIVLVDPYAKLIEGRRYFGDISRKLSKFLGTYDFDSLPFDWGENYNLPNIAEKDLVIYEMNVRAFTMDESSELDNNIRGSYLGVIEKIPHLLELGINAVELLPIFEFDEMELQRRPNPRDHMINTWGYSTINFFAPMSRYASAGGGPANASQELKQMVKALHSAGIEVILDVVYNHTNEADDPNPYTTSFRGIDNKVYYMLDDKGQLLNFSGCGNTLNCNHPVVMDLILDSLRHWVTEYHVDGFRFDLASILCRGTDGAPLNAPPLIRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDIRKFIKGDSGMKGSFATRVSGSSDLYRVNKRRPYHGINFVIAHDGFSLRDLVSYNFKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDSAINFFLWDQLDARKGDHFRFFSNAIKYRHAHKTLSHENFLSENEITWHEDNWDNYESKFLAFTLHDKSGGDIYLAFNAHDYFLKALLPTPPTKRKWFRVVDTNLQSPDDIVLDGVPGIGETYSIAPYSSILLEAKF 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07010 778 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 106 204 IPR004193 GO:0004553|GO:0005975
Mepo3g07010 778 Gene3D Immunoglobulins 88 223 IPR013783 -
Mepo3g07010 778 FunFam Glycogen debranching enzyme 230 684 - -
Mepo3g07010 778 Gene3D Glycosidases 230 684 - -
Mepo3g07010 778 PANTHER GLYCOGEN DEBRANCHING ENZYME 57 777 - -
Mepo3g07010 778 SMART aamy 254 661 IPR006047 GO:0005975
Mepo3g07010 778 Pfam Alpha amylase, catalytic domain 275 383 IPR006047 GO:0005975
Mepo3g07010 778 SUPERFAMILY Glycosyl hydrolase domain 684 777 - -
Mepo3g07010 778 CDD E_set_GDE_Isoamylase_N 105 254 IPR044505 -
Mepo3g07010 778 CDD AmyAc_Glg_debranch 234 673 - -
Mepo3g07010 778 SUPERFAMILY E set domains 101 238 IPR014756 -
Mepo3g07010 778 SUPERFAMILY (Trans)glycosidases 233 677 IPR017853 -
Mepo3g07010 778 Gene3D - 685 778 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07010 Mepo-Chr3 83704119 83717730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07010 6 777 Glycoside Hydrolase AT4G09020 71.798 0.0 1179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07010 K01214 - gmx:100807545 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07010 3 83704119 83717730 Mepo3g07010 3 83704119 83717730 ECH