Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06994 ATGGCAGCCACCACGACCACTACTCCTTCCAGATCTCCTTTCTTTTCGCACCCCCCTTTCCCTAAACGCACCACCACACTCACATTCCCTCTCTCTCCTGTTCTCAACAAACCAAAAACCACTCACTCTCGTATCGGAATCTCATGCTCCCTCAAACCCTCCACCGCACCACCTTCCACCACCACCACCACCACCGACGACGAGCCATTCATCTCTCGTTTCTCCTCCACCCAACCCCGAAAAGGCTCCGACATTCTCGTTGAAGCCTTAGAACGCGAAGGCGTTACCAACGTCTTCGCTTACCCTGGCGGCGCTTCCATGGAGATCCACCAAGCTCTCACCCGTTCCAAAACCATCCGTAACATTCTCCCCCGTCACGAACAAGGCGGAGTCTTCGCCGCCGAAGGTTACGCTCGCTCATCCGGTCTTCCCGGCGTTTGTATCGCCACCTCTGGTCCTGGTGCCACCAACTTAGTCAGCGGCCTCGCTGACGCTTTGATGGATAGCGTCCCTCTCATCGCTATTACCGGTCAAGTTCCCCGGAGAATGATCGGAACTGATGCTTTTCAAGAAACACCAATAGTTGAAGTAACGAGATCTATCACAAAGCATAACTATCTCATTCTTGATGTTGAAGATATTCCCAGGGTCGTCAAAGAAGCGTTTTTCCTTGCAACTTCCGGCCGCCCCGGCCCGGTTCTCATTGATGTACCCAAAGATGTTCAACAACAACTCGCTGTTCCGAATTGGTCCGAGCCCATTAAGCTAACTGGGTATTTATCCAGGTTACCTAAGATTCCTGGTGAGGCTCAGTTAGAGCAGGTTTTAAGGTTGTTGTTAGAATCTAAAAAGCCTGTTTTATATGTTGGCGGTGGTTGTTTGAATTCTAGTGATGAATTGAAGCGGTTTGTGGAGTTAACTGGTGTTCCTGTTGCTAGTACTTTGATGGGACTAGGTAGTTACCCTATTGGAGGTGAACATTCTCTTTCAATGTTGGGTATGCATGGAACTGTTTATGCTAATTATGCTGTTGATAATAGTGATCTGTTGCTTGCTTTTGGGGTTAGGTTTGATGATAGAGTTACTGGAAAGTTAGAAGCTTTTGCTAGTAGAGCTAAGATTGTTCATATAGATATTGATTCAGCTGAGATTGGGAAGAATAAGATTCCACATGTGTCGATTTGTGCCGATATGAAGGTGGCGTTGGAAGGTCTTAATAGAGTTTTGGAGAGTAAAGGAATCAAGGGGAAACTTGATTTTGAGGCATGGAGGCAGGAGTTGAATGTGCAGAAGTTGAAATTTCCTCTTGGTTTTAAGACATTCGAGGATGCAATTTCGCCTCAGTATGCTATTCAGGTGCTTGATGAATTGACGAATGGTGATGCTATTGTTAGTACTGGTGTTGGACAGCATCAAATGTGGTCTGCTCAGTTTTACAAGTATAAGAGACCTAGGCAGTGGTTAACTTCTGGTGGACTTGGTGCTATGGGTTTTGGATTACCTGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCAATTGTCGTTGATATTGACGGGGATGGTAGTTTTATGATGAACGTTCAAGAGTTGGCGACTATAAGAGTAGAGAATCTTCCGGTTAAGATCCTCTTGTTGAATAATCAACATTTGGGTATGGTTGTTCAATGGGAGGATAGATTCTACAAGGCAAATAGAGCTCATACATATCTTGGCGACCCTTCTAAGGAGGATGAGATTTTCCCTAACATGCTTGGATTTGCTGATGCTTGTGGAATACCGGCTGCTCGTGTGGCCAAGAAGGAAGAGCTTAGAGAAGCCATTCAGAAAATGTTGGACACTCCCGGTCCTTATCTTCTTGATGTTATTGTACCTCATCAAGAACATGTATTGCCAATGATTCCTAGTAATGGTTCATTCAAGGACGTGATCACCGAGGGTGATGGAAGAAGGAGTTATTGA 1962 0.4587 MAATTTTTPSRSPFFSHPPFPKRTTTLTFPLSPVLNKPKTTHSRIGISCSLKPSTAPPSTTTTTTDDEPFISRFSSTQPRKGSDILVEALEREGVTNVFAYPGGASMEIHQALTRSKTIRNILPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVEDIPRVVKEAFFLATSGRPGPVLIDVPKDVQQQLAVPNWSEPIKLTGYLSRLPKIPGEAQLEQVLRLLLESKKPVLYVGGGCLNSSDELKRFVELTGVPVASTLMGLGSYPIGGEHSLSMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHVSICADMKVALEGLNRVLESKGIKGKLDFEAWRQELNVQKLKFPLGFKTFEDAISPQYAIQVLDELTNGDAIVSTGVGQHQMWSAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFMMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSKEDEIFPNMLGFADACGIPAARVAKKEELREAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRRSY 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06994 653 Pfam Thiamine pyrophosphate enzyme, central domain 273 405 IPR012000 GO:0000287|GO:0030976
Mepo3g06994 653 FunFam Acetolactate synthase 75 257 - -
Mepo3g06994 653 SUPERFAMILY DHS-like NAD/FAD-binding domain 269 435 IPR029035 -
Mepo3g06994 653 Gene3D - 272 436 - -
Mepo3g06994 653 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g06994 653 ProSitePatterns Thiamine pyrophosphate enzymes signature. 504 523 IPR000399 GO:0000287|GO:0030976
Mepo3g06994 653 Gene3D - 437 623 - -
Mepo3g06994 653 FunFam Acetolactate synthase, mitochondrial 436 651 - -
Mepo3g06994 653 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 81 244 IPR012001 GO:0030976
Mepo3g06994 653 CDD TPP_PYR_POX_like 84 239 - -
Mepo3g06994 653 NCBIfam biosynthetic-type acetolactate synthase large subunit 81 645 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Mepo3g06994 653 Gene3D - 70 263 - -
Mepo3g06994 653 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 78 642 IPR045229 -
Mepo3g06994 653 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 74 256 IPR029061 -
Mepo3g06994 653 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 444 645 IPR029061 -
Mepo3g06994 653 CDD TPP_AHAS 445 636 IPR039368 GO:0030976
Mepo3g06994 653 MobiDBLite consensus disorder prediction 42 77 - -
Mepo3g06994 653 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 467 622 IPR011766 GO:0003824|GO:0030976
Mepo3g06994 653 FunFam Acetolactate synthase 265 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06994 Mepo-Chr3 83549475 83551832 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06994 K01652 - gmx:100782250 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06994 3 83549475 83551832 Mepo3g06994 3 83549475 83551832 ECH