Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06971 ATGTCGTCCCACCACAGTCATCTATCTTTTGCCTTTGGAGTTCTAGGCAACATTTCATCCTTTGTGTGCTTTCTAGCACCACTACCAACATTTTATCGAATTTGTAAGAAGAAATCAACAGAAGGTTTCCAATCAATTCCATATGTGGCTGCACTATTTAGTGCAATGCTTTGGATGTTTTATGCCTATACCAAGAAGGGTGAAACTCTTCTTATCACCATCAATGCATTCGGTTGTGTGATAGAGACAATTTACCTCGCAGTTTTTGTCATTTACTGCCCCAAGAAAGTTAGGATGTCAACATTGAGGATGATTGTGTTGATGAACTTTGTGGGATTTGGCACGATTGTCGTGTTAACTCACTTCCTAGCAAAACAAGAAGAAGGACGCATTAAGCTTCTTGGATGGATTTGTGTAGTTTTTGCTACTAGTGTTTTTGCAGCCCCTTTAAGTATCATTAGAGTTGTTATTCGTACCAAAAGTGTAGAGTTCCTTCCTTTTCCTCTTTCAGTTCTCCTCCTCATAAGCGCGGTTATGTGGCTGTTGTATGGTCTTTCTCTCCGAGATATCTATGTTACTCTCCCGAACGTTGTGGGGTTAACATTTGGAATAGTTCAGATCACACTCTATGCAATGTACAGAAACAGCAAACCCGTAATTGATGAGAAGCTACCAGAACACAAAGGAGACATTGTCGACAAAGAAATTGAAAGCGTAGTTGTTCCAAGCAAGACAACAAATGATGAGAATGTTGATATGGTGATTGTGGAGAAAAAGGAAGAGAAACAAGATGAAGAACATGAAGAGAAAGAGAAGAAACAGGAGCAAGTAACACAGGACAAAACAAAGGTTAAGAATGAAAATGACAACATTAATATCAACAAAACAGAGGTGAAGGATAGTGGTTGCAAAGTTTAA 918 0.3889 MSSHHSHLSFAFGVLGNISSFVCFLAPLPTFYRICKKKSTEGFQSIPYVAALFSAMLWMFYAYTKKGETLLITINAFGCVIETIYLAVFVIYCPKKVRMSTLRMIVLMNFVGFGTIVVLTHFLAKQEEGRIKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSVLLLISAVMWLLYGLSLRDIYVTLPNVVGLTFGIVQITLYAMYRNSKPVIDEKLPEHKGDIVDKEIESVVVPSKTTNDENVDMVIVEKKEEKQDEEHEEKEKKQEQVTQDKTKVKNENDNININKTEVKDSGCKV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06971 305 Coils Coil 253 287 - -
Mepo3g06971 305 PANTHER RAG1-ACTIVATING PROTEIN 1 14 267 IPR047664 -
Mepo3g06971 305 MobiDBLite consensus disorder prediction 258 305 - -
Mepo3g06971 305 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016020
Mepo3g06971 305 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
Mepo3g06971 305 Gene3D - 11 96 - -
Mepo3g06971 305 FunFam Bidirectional sugar transporter SWEET 10 98 - -
Mepo3g06971 305 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Mepo3g06971 305 Gene3D - 129 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06971 Mepo-Chr3 83366754 83368834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06971 5 254 Miscellaneous Gene Families AT5G23660 55.600 3.01e-94 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06971 K15382 - gmx:100810426 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06971 3 83366754 83368834 Mepo3g06971 3 83366754 83368834 ECH
Mepo2g04548 2 53925862 53929132 Mepo3g06971 3 83366754 83368834 PCT