Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06950 ATGTTTCAGTCACTGGGAAATCTCTTTGCGAACTCGGTTTGGGAGGAGCTTTTGCACGCAACAAGTACTTTGCAAACTGATGACACTCCTTTTGGTTCATCCAAAGCTGAAAAAAACAAGTTAGGTCATGCAAAAAAACCAGAACACGATGATCTTATTTCACTAAAGGAAAGATTCATTCATGCAAAGTATTCAGAGAAAGTATTTGTTCGGCGGATGCCAAAAAGTCACCATCTTCTTTCAGTGGGGCAACAAGTGATGGAATGCATCTATGCCAACGACAAGAAAGCAGTGTATCGGCACATTGTCAAATCGGACGTGGACATCAATTCTGTTAGTGGAGAGGCACTATCTGGCTTTTTTTCTCATATATCTTCTTCAAGTGACTCAAATACATCTTCAAGTAAAGTTCAGCTAATGGAGGACATACAAGAGGGTTCTAGTTTGCTTCACTTGGCATGCCTAACAAGTGATGTTGGAATGATCGAGCTTCTCCTACAGTATGGAGCAGATCTAAATGCTATTGATTCAAGAGGTAGGACACCATTGCATTACTGCATTATGAGAGGGAAGACTGCAGCTGCAAAATTGCTTATCACAAGGGGTGCCGATCCACTTGCTGTAGATAAAGAAGGCAACACTCCTCTTAAGCTTGCACCAGAACCTGGCGATATCGGCAAAATCCATGCTTCATTTCTAGAGAAAATTGAGGACCAACCAACAAGTCATTCGGATGTATAA 741 0.4157 MFQSLGNLFANSVWEELLHATSTLQTDDTPFGSSKAEKNKLGHAKKPEHDDLISLKERFIHAKYSEKVFVRRMPKSHHLLSVGQQVMECIYANDKKAVYRHIVKSDVDINSVSGEALSGFFSHISSSSDSNTSSSKVQLMEDIQEGSSLLHLACLTSDVGMIELLLQYGADLNAIDSRGRTPLHYCIMRGKTAAAKLLITRGADPLAVDKEGNTPLKLAPEPGDIGKIHASFLEKIEDQPTSHSDV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06950 246 Gene3D Arf GTPase activating protein 1 78 IPR038508 -
Mepo3g06950 246 ProSiteProfiles Ankyrin repeat profile. 178 210 IPR002110 GO:0005515
Mepo3g06950 246 ProSiteProfiles Ankyrin repeat region circular profile. 145 176 - -
Mepo3g06950 246 ProSiteProfiles Ankyrin repeat profile. 145 177 IPR002110 GO:0005515
Mepo3g06950 246 SUPERFAMILY Ankyrin repeat 92 223 IPR036770 -
Mepo3g06950 246 Gene3D - 109 234 IPR036770 -
Mepo3g06950 246 PANTHER CENTAURIN/ARF 1 222 IPR045258 GO:0005096
Mepo3g06950 246 MobiDBLite consensus disorder prediction 28 47 - -
Mepo3g06950 246 ProSiteProfiles Ankyrin repeat region circular profile. 178 204 - -
Mepo3g06950 246 SMART ANK_2a 178 207 IPR002110 GO:0005515
Mepo3g06950 246 SMART ANK_2a 145 174 IPR002110 GO:0005515
Mepo3g06950 246 Pfam Ankyrin repeats (many copies) 147 199 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06950 Mepo-Chr3 83145367 83146813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06950 160 219 Acyl Lipid Metabolism Gene Families AT5G53470 46.032 1.54e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06950 K12489 - gmx:100797073 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06950 3 83145367 83146813 Mepo3g06950 3 83145367 83146813 ECH